DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or33c and Or88a

DIOPT Version :10

Sequence 1:NP_523555.1 Gene:Or33c / 34603 FlyBaseID:FBgn0026390 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:373 Identity:81/373 - (21%)
Similarity:135/373 - (36%) Gaps:103/373 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VTLWFPLHLLLHLLLLPSTAEFFKNLTMSLTCVACSLKHVAHLYHLPQIVEIESLIEQLD----- 102
            :|::|.:..|:..|......||..:|...     |.                ..|:.|||     
  Fly    86 ITIYFSIRGLMLYLKRKEIVEFVNDLDRE-----CP----------------RDLVSQLDMQMDE 129

  Fly   103 TFIASEQEHRYYRDHVHCHARRFTRCLYISFGMIYALFLF---GVFVQV-----ISGNW------ 153
            |:....|.:|:.|.:.|.....|  |:     :..||||.   |....|     :.|.|      
  Fly   130 TYRNFWQRYRFIRIYSHLGGPMF--CV-----VPLALFLLTHEGKDTPVAQHEQLLGGWLPCGVR 187

  Fly   154 --ELLYPAYFPFDLESNRFLGAVALGYQVFSMLVEGFQGLGNDTYTPLTLCLLAGHVHLWSIRMG 216
              ...|...:.|||.      ....|...|..    |..|.|         ::.||:   .:.:|
  Fly   188 KDPNFYLLVWSFDLM------CTTCGVSFFVT----FDNLFN---------VMQGHL---VMHLG 230

  Fly   217 QLG------------------YFDDETVVNHQRLLDYI-EQHKLLVRFHNLVSRTISEVQLVQLG 262
            .|.                  :.|...:|..|:||:.: .::..:.:...|||..:         
  Fly   231 HLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCRKYNDIFKVAFLVSNFV--------- 286

  Fly   263 GCGATLCIIVSYMLFFVGDTISLVYYLVFFGVVCVQLFPSCYFASEVAEELERLPYAIFSSRWYD 327
            |.| :||..: :||....|.:.:..|::...|:....|..|...:::.:..|.|..::.|..||.
  Fly   287 GAG-SLCFYL-FMLSETSDVLIIAQYILPTLVLVGFTFEICLRGTQLEKASEGLESSLRSQEWYL 349

  Fly   328 QSRDHRFDLLIFTQLTLGNRGWIIKAGGLIELNLNAFFATLKMAYSLF 375
            .||.:|...|::||..  .|...:.|.|||::|:..|...:::||.||
  Fly   350 GSRRYRKFYLLWTQYC--QRTQQLGAFGLIQVNMVHFTEIMQLAYRLF 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or33cNP_523555.1 7tm_6 60..372 CDD:251636 73/351 (21%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 77/368 (21%)

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