DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or33c and Or23a

DIOPT Version :10

Sequence 1:NP_523555.1 Gene:Or33c / 34603 FlyBaseID:FBgn0026390 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster


Alignment Length:355 Identity:103/355 - (29%)
Similarity:176/355 - (49%) Gaps:21/355 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VLLHILVTLWFPLHLLLHLLLLPSTAEFFKNLTMSLTCVACS--LKHVAHLYHLPQIVEIESLIE 99
            :||.|||.|..|: ||..:.......|  .|.::|||..:.|  :|...::..|.::||::|||.
  Fly    37 MLLCILVYLPTPM-LLRGVYSFEDPVE--NNFSLSLTVTSLSNLMKFCMYVAQLTKMVEVQSLIG 98

  Fly   100 QLDTFIASEQEHRYYRDHVHCHARRFTRCLYISFGMIYALFLFGVFVQVISGNWELLYPAYFPFD 164
            |||..::.|.:...:|:... |..|.::...|::.::   |:......|......|..|.:||||
  Fly    99 QLDARVSGESQSERHRNMTE-HLLRMSKLFQITYAVV---FIIAAVPFVFETELSLPMPMWFPFD 159

  Fly   165 LESN--RFLGAVA---LGYQVFSMLVEGFQGLGNDTYTPLTLCLLAGHVHLWSIRMGQLGYFDDE 224
            .:::  .::||:.   :|| ||.::    |....|::.||.|.|::....|..:|:.::||....
  Fly   160 WKNSMVAYIGALVFQEIGY-VFQIM----QCFAADSFPPLVLYLISEQCQLLILRISEIGYGYKT 219

  Fly   225 TVVNHQRLLDYIEQHKLLVRFHNLVSRTISEVQLVQLGGCGATLCIIVSYMLFFVGDTISLVYYL 289
            ...|.|.|::.|.....|.|..::....:|...:||....|..:.|.:..::|:|......:|||
  Fly   220 LEENEQDLVNCIRDQNALYRLLDVTKSLVSYPMMVQFMVIGINIAITLFVLIFYVETLYDRIYYL 284

  Fly   290 VFFGVVCVQLFPSCYFASEVAEELERLPYAIFSSRWYDQSRDHRFDLLIFTQLTLGNRGWIIKAG 354
            .|...:.||.:|.||:.:.|.|....|.||:|.|.|.|||..:|..:||..:.|  .|..::.||
  Fly   285 CFLLGITVQTYPLCYYGTMVQESFAELHYAVFCSNWVDQSASYRGHMLILAERT--KRMQLLLAG 347

  Fly   355 GLIELNLNAFFATLKMAYSLFAVVVRAKGI 384
            .|:.::|:.:.|..|.|||.|.::....|:
  Fly   348 NLVPIHLSTYVACWKGAYSFFTLMADRDGL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or33cNP_523555.1 7tm_6 60..372 CDD:251636 89/318 (28%)
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 89/318 (28%)

Return to query results.
Submit another query.