DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or33b and Or13a

DIOPT Version :10

Sequence 1:NP_523554.1 Gene:Or33b / 34602 FlyBaseID:FBgn0026391 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:243 Identity:43/243 - (17%)
Similarity:77/243 - (31%) Gaps:103/243 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NINRNHGGIVLMNHQ--SALDLIVLAELWPIMG-------------------------------- 114
            ::|.:..|...|.||  ..|:...:|::..:||                                
  Fly   119 DVNSSLSGNGPMAHQIRQVLNKSFIAKIQDVMGIYIRELKEEFSKGLILPTDKVKPQVVTTGKTS 183

  Fly   115 -------RSTVVAKKEVLYMFPFGLACWLWGTLFIDRQ--NRDSAKSVINKEAKAINEKQ----- 165
                   ::||||:|:         |......:|..::  ..|:.|:..::..:|:.|.|     
  Fly   184 VVDKRQFQNTVVAEKD---------ASTSGNEVFSTKEVSTSDTYKATPDRVFEALTETQFVRGW 239

  Fly   166 -------------AKLLFFPEGTRGNGDKLLPFKKGCFHVAVESQAFIQPVVISKY--------H 209
                         .....|.|...|..:|:.|.|:           .::...:.||        |
  Fly   240 TNNSIGEWNFKEGGSFALFGENVTGTFEKIEPNKE-----------IVKKWRLKKYPNNHHATIH 293

  Fly   210 FLKSKAKIFNRGQNIIKILPEVSCAGLSKDDIPA-LMERVQKMMQREY 256
            |   :.|....|.: |||:.:         |:|. |.|..|:.:.|.|
  Fly   294 F---QLKDTGSGTD-IKIIAK---------DVPTHLAEETQQGLDRYY 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or33bNP_523554.1 7tm_6 61..369 CDD:251636 43/243 (18%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 43/243 (18%)

Return to query results.
Submit another query.