DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EYS and Efemp1

DIOPT Version :9

Sequence 1:NP_001278938.1 Gene:EYS / 346007 HGNCID:21555 Length:3165 Species:Homo sapiens
Sequence 2:NP_666127.2 Gene:Efemp1 / 216616 MGIID:1339998 Length:493 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EYSNP_001278938.1 Plasmod_Pvs28 195..>283 CDD:283826
EGF_CA 681..731 CDD:238011
EGF_CA 733..769 CDD:238011
EGF_CA 773..806 CDD:238011
EGF_CA 810..846 CDD:238011
EGF_CA 890..926 CDD:238011
EGF_CA 929..964 CDD:238011
EGF_CA 966..1002 CDD:238011
EGF_CA 1004..1040 CDD:238011
EGF_CA 1080..1115 CDD:238011
EGF_CA 1118..1159 CDD:238011
EGF_CA 1161..1197 CDD:238011
LamG 1886..2044 CDD:238058
LamG 2149..2315 CDD:238058
Laminin_G_2 2461..2582 CDD:280389
EGF_CA 2657..2689 CDD:238011
LamG 2740..2877 CDD:214598
Laminin_G_2 3007..3138 CDD:280389
Efemp1NP_666127.2 EGF_CA 173..>206 CDD:311536
EGF_CA 214..244 CDD:214542
cEGF 234..257 CDD:372248
Mediates interaction with TIMP3. /evidence=ECO:0000250 259..493
cEGF 274..297 CDD:372248
EGF_CA 294..333 CDD:214542
EGF_CA 334..>359 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
HGNC 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.