DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mal-B1 and Amy1a

DIOPT Version :9

Sequence 1:NP_609522.1 Gene:Mal-B1 / 34597 FlyBaseID:FBgn0032381 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001010970.1 Gene:Amy1a / 24203 RGDID:2113 Length:521 Species:Rattus norvegicus


Alignment Length:589 Identity:118/589 - (20%)
Similarity:190/589 - (32%) Gaps:207/589 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIAFILSVGLVGILAHKHQSKELDAKYNWWQHEVFYQIYPRS-----FQDSNGDGIGDLQGITSR 64
            ::.|.|.:.|:|:.              |.|::. :..|.||     |:....|...:.:     
  Rat    10 RMKFFLLLSLIGLC--------------WAQYDP-HTFYGRSSIVHLFEWRWVDIAKECE----- 54

  Fly    65 LQYFKDTGITSVWLSPIYESPMVDF-------GYDISNYTNIQPEYGTLEDFDALIAKANELGVK 122
             :|....|...|.:||..|:.:|:.       .|...:| .|....|..::|..::.:.|.:||:
  Rat    55 -RYLAPNGFGGVQVSPPNENIVVNSPFRPWWERYQPISY-KICSRSGNEDEFRDMVNRCNNVGVR 117

  Fly   123 VILDFVPNH----------SSNKHPWFIKSVAREPGYEDF-------YVWEDGILLENGTRVPPN 170
            :.:|.|.||          ||....:|      .|...||       :.:.|| ..:.|      
  Rat   118 IYVDAVINHMCGVGAEAGQSSTCGSYF------NPNNRDFPGVPYSGFDFNDG-KCKTG------ 169

  Fly   171 NWLSVFSGSAWMWNDERQQYYLRQFTYGQPDLNYRNPAVIKAMDDVMLFWLNKGIAGFRID---- 231
                  ||....:||..|....|  ..|..||......|...:.|.|...::.|:||||:|    
  Rat   170 ------SGGIENYNDAAQVRDCR--LSGLLDLALEKDYVRTKVADYMNHLIDIGVAGFRLDASKH 226

  Fly   232 -------AII-----------------YIYEDA-QLRDEPPS-------GTTDDPNNEAYLSHI- 263
                   |::                 :||::. .|..|..|       |...:....|.|..: 
  Rat   227 MWPGDIKAVLDKLHNLNTKWFSEGSKPFIYQEVIDLGGEAVSSNEYFGNGRVTEFKYGAKLGKVL 291

  Fly   264 ---------YTRNQPEDYGLLQHWRQLLDNYTANHDG----------------------PLRIMM 297
                     |.:|..|.:|.:...|.|:  :..|||.                      .:..|:
  Rat   292 RKWDGEKMAYLKNWGEGWGFMPSDRALV--FVDNHDNQRGHGAGGSSILTFWDARLYKMAVGFML 354

  Fly   298 TEGYASVSQLMEYY--------EDSNGVQGPQFPFNFDFITE--LNANSTAADFVFYISRW---- 348
            ...|.....:..::        :|.|...||  |.|.....|  :|::||..:......||    
  Rat   355 AHPYGFTRVMSSFHWPRYFENGKDVNDWVGP--PNNNGATKEVTINSDSTCGNDWVCEHRWRQIR 417

  Fly   349 ----LIYMPHGH-VANWVMGNHDNPRVASRFGEKSVDAMNMLLMTLPGIGITYNGEELGMT---- 404
                ...:.:|. .||| ..|..| :||...|.|..              |.:|.::..::    
  Rat   418 NMVAFRNVVNGQPFANW-WDNGSN-QVAFGRGNKGF--------------IVFNNDDWDLSTTLQ 466

  Fly   405 ------DYRDISWSDTVDQPACEAGIDNYKTISRDPERTPMQWSSDVNAGFS---SADRTWLPVN 460
                  .|.|:...|.||...  .||..|.             .||.||.||   ||:..::.::
  Rat   467 TGLPAGTYCDVISGDKVDGNC--TGIKVYV-------------GSDGNAYFSISNSAEDPFIAIH 516

  Fly   461 PNYK 464
            ...|
  Rat   517 VESK 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mal-B1NP_609522.1 AmyAc_maltase 30..500 CDD:200467 114/564 (20%)
trehalose_treC 33..538 CDD:274115 114/561 (20%)
Amy1aNP_001010970.1 AmyAc_bac_euk_AmyA 35..426 CDD:200456 82/422 (19%)
AmyA 56..>325 CDD:223443 62/292 (21%)
Aamy_C 432..520 CDD:214749 27/118 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337373
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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