DRSC/TRiP Functional Genomics Resources

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Protein Alignment esc and mes-6

DIOPT Version :9

Sequence 1:NP_477431.1 Gene:esc / 34595 FlyBaseID:FBgn0000588 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001370414.1 Gene:mes-6 / 177657 WormBaseID:WBGene00003224 Length:459 Species:Caenorhabditis elegans


Alignment Length:440 Identity:117/440 - (26%)
Similarity:185/440 - (42%) Gaps:80/440 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RSTKSKPKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQ-GGMQ 113
            |||:...|  ..:.....:.|:....|:|.|||...|.||.|..||.|.:.:.:|..|.. ..::
 Worm    17 RSTEDYGK--RPFVLTAKLLEDQKKAIYGCAFNQYAGIDEEQAVATVGGSFLHMYSVPIDINNIE 79

  Fly   114 L-LHCYADPDP------DEVFYTCAWSYDL----KTSSPL-LAAAGYRGVIRVIDVEQNEAVGNY 166
            | ..|....|.      :|..:|..|.||.    ...:|. :...|..|.|.|||....:.....
 Worm    80 LQWSCNFPTDKSSKVEREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLSNRL 144

  Fly   167 IGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRI 231
            ...|..||:::..|....|::..|.|.:||:.:|::..|:.::||:|.|...:||:|::..||.|
 Worm   145 RSVGWEINDIRTCPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVDWSTDGDFI 209

  Fly   232 VSSGMDHSLKLWCLNTPEFHHKIELS---------NTFSQ-------EKSTLPFPTVTKHFPD-- 278
            :|.|.||.|..|.|:..:....:|.:         |..:|       .|.|:....|:::.||  
 Worm   210 LSCGFDHQLMEWDLSVKQVKEHLERACKALHQDKINVLTQSQDIPYVSKGTMRKSAVSRNIPDKE 274

  Fly   279 --------------------------FSTRDIHRNYVDCVQWF--GNFVLSKSC--ENAIVCWKP 313
                                      .|| |:|.:||||:::.  .|:.|||.|  |.||..|:.
 Worm   275 EDQLLELHRELIPRPSCLLPIYTPSSVST-DMHSDYVDCIRFLIGTNYALSKGCGNEKAIHFWRF 338

  Fly   314 G--------QLHQSFEQVKPSDSSCTI-IAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVW 369
            |        ::|.:..:.|    |||. ...........||::|..:|.::.:..|...|.|..:
 Worm   339 GPPKGEVENRIHGNVLRPK----SCTTKFRTMNVPSGSAWFIKFAVDPRRRWLVCGGAGGSVMFF 399

  Fly   370 ELDPSDPEGAHMTTLHNSRSVATVRQIAFSRDASVLVYVCDDATVWRWNR 419
            :|..::......|....||   ||||.:||.....||.|.|:..|.|::|
 Worm   400 DLRNNEETNPTHTCSVGSR---TVRQASFSTCGRFLVLVTDEGFVCRFDR 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
escNP_477431.1 WD40 <67..425 CDD:225201 113/423 (27%)
WD40 72..418 CDD:295369 111/415 (27%)
WD40 repeat 76..122 CDD:293791 16/47 (34%)
WD40 repeat 128..168 CDD:293791 11/44 (25%)
WD40 repeat 173..210 CDD:293791 10/36 (28%)
WD40 repeat 220..282 CDD:293791 22/105 (21%)
WD40 repeat 289..337 CDD:293791 18/60 (30%)
WD40 repeat 345..386 CDD:293791 8/40 (20%)
WD40 repeat 393..417 CDD:293791 10/23 (43%)
mes-6NP_001370414.1 WD40 120..433 CDD:421866 82/320 (26%)
WD40 repeat 152..192 CDD:293791 11/39 (28%)
WD40 repeat 197..233 CDD:293791 13/35 (37%)
WD40 repeat 245..280 CDD:293791 7/34 (21%)
WD40 repeat 310..367 CDD:293791 18/60 (30%)
WD40 repeat 375..415 CDD:293791 8/39 (21%)
WD40 repeat 420..444 CDD:293791 10/23 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156333
Domainoid 1 1.000 61 1.000 Domainoid score I6922
eggNOG 1 0.900 - - E1_KOG1034
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3239
Isobase 1 0.950 - 0 Normalized mean entropy S1215
OMA 1 1.010 - - QHG59795
OrthoDB 1 1.010 - - D1191277at2759
OrthoFinder 1 1.000 - - FOG0005723
OrthoInspector 1 1.000 - - otm14628
orthoMCL 1 0.900 - - OOG6_102885
Panther 1 1.100 - - O PTHR10253
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2640
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.750

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