DRSC/TRiP Functional Genomics Resources

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Protein Alignment esc and lrwd1

DIOPT Version :9

Sequence 1:NP_477431.1 Gene:esc / 34595 FlyBaseID:FBgn0000588 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_031751539.1 Gene:lrwd1 / 100145159 XenbaseID:XB-GENE-959481 Length:726 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
escNP_477431.1 WD40 <67..425 CDD:225201
WD40 72..418 CDD:295369
WD40 repeat 76..122 CDD:293791
WD40 repeat 128..168 CDD:293791
WD40 repeat 173..210 CDD:293791
WD40 repeat 220..282 CDD:293791
WD40 repeat 289..337 CDD:293791
WD40 repeat 345..386 CDD:293791
WD40 repeat 393..417 CDD:293791
lrwd1XP_031751539.1 LRR <19..286 CDD:227223
LRR_8 23..81 CDD:404697
leucine-rich repeat 23..48 CDD:275380
leucine-rich repeat 49..70 CDD:275380
leucine-rich repeat 71..92 CDD:275380
leucine-rich repeat 93..118 CDD:275380
WD40 368..724 CDD:421866
WD40 repeat 466..503 CDD:293791
WD40 repeat 513..566 CDD:293791
WD40 repeat 575..612 CDD:293791
WD40 repeat 633..676 CDD:293791
WD40 repeat 681..723 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10253
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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