DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and PDE2

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_015005.1 Gene:PDE2 / 854542 SGDID:S000005887 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:446 Identity:107/446 - (23%)
Similarity:171/446 - (38%) Gaps:93/446 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   637 NPAAVHRQR-----RLRTPTWARSMSTNK-TRL--------ADEDDELSE-----VQPDAVPPEV 682
            |.:|:...|     ||.......|:..|: ||:        .|..|.:::     |..::||.:.
Yeast    88 NISAIDHTREENLQRLECVERENSICRNRITRINHWMYHHHDDTPDGINKNSYGTVNGNSVPTQA 152

  Fly   683 REWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALTAFPPDVVRLLKN-- 745
            .|  |:.:|..:..:..|:.         |..:|.  |.|:.|.:.   ..:|..|.:..:..  
Yeast   153 CE--ANIYTLLLHLNDSKAQ---------HLRKAS--VPRLIRNIE---FMSFLSDPIEKISQEG 201

  Fly   746 ------LDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYR 804
                  |..|.|...:|    |.|.:.:..:.|..:.....|..||...|...|..:|..|.:. 
Yeast   202 SHYWNILSTWDFCALSL----STQELIWCGFTLIKKLSKDAKVLIADNKLLLLLFTLESSYHQV- 261

  Fly   805 NPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETAL 869
            |.:||..||:||||.. :.||...|.:  ..::.....:||:.||..|.||.|.......||.|.
Yeast   262 NKFHNFRHAIDVMQAT-WRLCTYLLKD--NPVQTLLLCMAAIGHDVGHPGTNNQLLCNCESEVAQ 323

  Fly   870 LYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQL 934
            .:.:.::|||.|.....:||.|....:|| :|:::|    ..:.|.:|.|||..|.|....:...
Yeast   324 NFKNVSILENFHRELFQQLLSEHWPQLLS-ISKKKF----DFISEAILATDMALHSQYEDRLMHE 383

  Fly   935 LTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTML---------LLEEFFRQ--------G 982
            ..:::.|:     :||::...|||:..:...:..||..|         |||.|.:.        |
Yeast   384 NPMKQITL-----ISLIIKAADISNVTRTLSISARWAYLITLEFNDCALLETFHKAHRPEQDCFG 443

  Fly   983 DLEKELGLPFSPLCDRNNTLV---------------AESQICFIDFIVEPSMGVMS 1023
            |..|.:..|...|....|.||               ...||.||:...|.....:|
Yeast   444 DSYKNVDSPKEDLESIQNILVNVTDPDDIIKDHPHIPNGQIFFINTFAEVFFNALS 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 11/60 (18%)
PDEase_I 807..1026 CDD:278654 67/249 (27%)
PDE2NP_015005.1 PDEase_I 264..513 CDD:395177 67/249 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X171
TreeFam 00.000 Not matched by this tool.
33.000

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