DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and Pde1c

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_112340.1 Gene:Pde1c / 81742 RGDID:68332 Length:768 Species:Rattus norvegicus


Alignment Length:752 Identity:282/752 - (37%)
Similarity:389/752 - (51%) Gaps:219/752 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 ESLPPVDTPDALNKAAGRIRSLLRRMDHETVAYEDMQRNLHYAARVLEAVFIDESREGCNGNCKN 485
            :.||.:|:|:||.|.:.|:|||:::::....:..|:::||.|||.|||:|:|||:|         
  Rat    86 DELPQLDSPEALVKTSFRLRSLVKQLERGEASVVDLKKNLEYAATVLESVYIDETR--------- 141

  Fly   486 LNCSRHSHGRDDQQQDNNNSNRSCSLQEASPGGAGAGVTPGADNQDSIESRTKGVSQAPQTHSGP 550
                                                                             
  Rat   142 ----------------------------------------------------------------- 141

  Fly   551 TGPPSNTSSETIAQPAPKLQPALETVRESVMEESPSKDPGDKGPPPPASTSTLTSQTTTSSSATA 615
                                                                             
  Rat   142 ----------------------------------------------------------------- 141

  Fly   616 EPSAKAAESQAGSAGSSGSCSNPAAVHRQRRLRTPTWARSMSTNKTRLADEDDELSEVQPDAVPP 680
                                                          ||.|.:||||::|.||||.
  Rat   142 ----------------------------------------------RLLDTEDELSDIQSDAVPS 160

  Fly   681 EVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALTAFPPDVVRLLKN 745
            |||:||||||||||....|:|||||:|:|:.||::|||||:|||||.|:....::||.|:..||:
  Rat   161 EVRDWLASTFTRQMGMMLRRSDEKPRFKSIVHAVQAGIFVERMYRRTSNMVGLSYPPAVIDALKD 225

  Fly   746 LDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNN 810
            :|.|:||||:|.||:....:|::.|||..||..|.:|||....|.:|:..:|.||.:::|||||.
  Rat   226 VDTWSFDVFSLNEASGDHALKFIFYELLTRYDLISRFKIPISALVSFVEALEVGYSKHKNPYHNL 290

  Fly   811 LHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRA 875
            :||.||.||:||.|..||:.||||:|||||.:.:|.:|||||||||||||:.:.|:.|:|||||:
  Rat   291 MHAADVTQTVHYLLYKTGVANWLTELEIFAIIFSAAIHDYEHTGTTNNFHIQTRSDPAILYNDRS 355

  Fly   876 VLENHHASASFRLLRED-EYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQE 939
            ||||||.||::|||:|| |.|||.:||::::||.|.||||||:.|||:.||||:|||:..|...|
  Rat   356 VLENHHLSAAYRLLQEDEEMNILVNLSKDDWREFRTLVIEMVMATDMSCHFQQIKAMKTALQQPE 420

  Fly   940 ATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVA 1004
            | |:|.|.|||:||..|||||||.|.:||||||.||||||||||.|.||||||||||||.:|:||
  Rat   421 A-IEKPKALSLMLHTADISHPAKAWDLHHRWTMSLLEEFFRQGDREAELGLPFSPLCDRKSTMVA 484

  Fly  1005 ESQICFIDFIVEPSMGVMSDMLELILAPIAPMNKSKPATLVEHETTANSTTNSAIVIPNSGITPS 1069
            :||:.||||||||:..|::||.|.|::|:.. ..|:.....:..::.||..:|..          
  Rat   485 QSQVGFIDFIVEPTFTVLTDMTEKIVSPLID-ETSQTGGTGQRRSSLNSINSSDA---------- 538

  Fly  1070 MDKPRDHRTEAKTTAAECLA--RKSVTGTTASKFNIPKPWLTCLVENKRIWK------EQAVKDA 1126
                  .|:..|::.:|..|  ..||.......|.  ..|...:..|:..|:      |:|.|:|
  Rat   539 ------KRSGVKSSGSEGSAPINNSVIPVDYKSFK--ATWTEVVQINRERWRAKVPKEEKAKKEA 595

  Fly  1127 EARA-LATAAEEAAAAAAAEAEE---SKPETETADGE 1159
            |.:| ||...::....|.::||:   ||.|.:|: ||
  Rat   596 EEKARLAAEEKQKEMEAKSQAEQGTTSKAEKKTS-GE 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497 40/59 (68%)
PDEase_I 807..1027 CDD:459723 146/220 (66%)
Pde1cNP_112340.1 PDEase_I_N 142..202 CDD:462497 0/59 (0%)
Calmodulin-binding. /evidence=ECO:0000250|UniProtKB:P14100 183..206 0/22 (0%)
PDEase_I 287..515 CDD:459723 102/227 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 513..557 31/43 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..719 79/134 (59%)
PTZ00121 <603..>695 CDD:173412 64/91 (70%)

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