DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and Pde1c

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_112340.1 Gene:Pde1c / 81742 RGDID:68332 Length:768 Species:Rattus norvegicus


Alignment Length:752 Identity:282/752 - (37%)
Similarity:389/752 - (51%) Gaps:219/752 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 ESLPPVDTPDALNKAAGRIRSLLRRMDHETVAYEDMQRNLHYAARVLEAVFIDESREGCNGNCKN 485
            :.||.:|:|:||.|.:.|:|||:::::....:..|:::||.|||.|||:|:|||:|         
  Rat    86 DELPQLDSPEALVKTSFRLRSLVKQLERGEASVVDLKKNLEYAATVLESVYIDETR--------- 141

  Fly   486 LNCSRHSHGRDDQQQDNNNSNRSCSLQEASPGGAGAGVTPGADNQDSIESRTKGVSQAPQTHSGP 550
                                                                             
  Rat   142 ----------------------------------------------------------------- 141

  Fly   551 TGPPSNTSSETIAQPAPKLQPALETVRESVMEESPSKDPGDKGPPPPASTSTLTSQTTTSSSATA 615
                                                                             
  Rat   142 ----------------------------------------------------------------- 141

  Fly   616 EPSAKAAESQAGSAGSSGSCSNPAAVHRQRRLRTPTWARSMSTNKTRLADEDDELSEVQPDAVPP 680
                                                          ||.|.:||||::|.||||.
  Rat   142 ----------------------------------------------RLLDTEDELSDIQSDAVPS 160

  Fly   681 EVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALTAFPPDVVRLLKN 745
            |||:||||||||||....|:|||||:|:|:.||::|||||:|||||.|:....::||.|:..||:
  Rat   161 EVRDWLASTFTRQMGMMLRRSDEKPRFKSIVHAVQAGIFVERMYRRTSNMVGLSYPPAVIDALKD 225

  Fly   746 LDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNN 810
            :|.|:||||:|.||:....:|::.|||..||..|.:|||....|.:|:..:|.||.:::|||||.
  Rat   226 VDTWSFDVFSLNEASGDHALKFIFYELLTRYDLISRFKIPISALVSFVEALEVGYSKHKNPYHNL 290

  Fly   811 LHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRA 875
            :||.||.||:||.|..||:.||||:|||||.:.:|.:|||||||||||||:.:.|:.|:|||||:
  Rat   291 MHAADVTQTVHYLLYKTGVANWLTELEIFAIIFSAAIHDYEHTGTTNNFHIQTRSDPAILYNDRS 355

  Fly   876 VLENHHASASFRLLRED-EYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQE 939
            ||||||.||::|||:|| |.|||.:||::::||.|.||||||:.|||:.||||:|||:..|...|
  Rat   356 VLENHHLSAAYRLLQEDEEMNILVNLSKDDWREFRTLVIEMVMATDMSCHFQQIKAMKTALQQPE 420

  Fly   940 ATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVA 1004
            | |:|.|.|||:||..|||||||.|.:||||||.||||||||||.|.||||||||||||.:|:||
  Rat   421 A-IEKPKALSLMLHTADISHPAKAWDLHHRWTMSLLEEFFRQGDREAELGLPFSPLCDRKSTMVA 484

  Fly  1005 ESQICFIDFIVEPSMGVMSDMLELILAPIAPMNKSKPATLVEHETTANSTTNSAIVIPNSGITPS 1069
            :||:.||||||||:..|::||.|.|::|:.. ..|:.....:..::.||..:|..          
  Rat   485 QSQVGFIDFIVEPTFTVLTDMTEKIVSPLID-ETSQTGGTGQRRSSLNSINSSDA---------- 538

  Fly  1070 MDKPRDHRTEAKTTAAECLA--RKSVTGTTASKFNIPKPWLTCLVENKRIWK------EQAVKDA 1126
                  .|:..|::.:|..|  ..||.......|.  ..|...:..|:..|:      |:|.|:|
  Rat   539 ------KRSGVKSSGSEGSAPINNSVIPVDYKSFK--ATWTEVVQINRERWRAKVPKEEKAKKEA 595

  Fly  1127 EARA-LATAAEEAAAAAAAEAEE---SKPETETADGE 1159
            |.:| ||...::....|.::||:   ||.|.:|: ||
  Rat   596 EEKARLAAEEKQKEMEAKSQAEQGTTSKAEKKTS-GE 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 37/55 (67%)
PDEase_I 807..1026 CDD:278654 145/219 (66%)
Pde1cNP_112340.1 PDEase_I_N 146..202 CDD:285672 0/55 (0%)
PDEase_I 287..515 CDD:278654 102/227 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 513..557 31/43 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..719 79/134 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 305 1.000 Domainoid score I1318
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 539 1.000 Inparanoid score I1143
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D439875at33208
OrthoFinder 1 1.000 - - FOG0001902
OrthoInspector 1 1.000 - - otm45227
orthoMCL 1 0.900 - - OOG6_100946
Panther 1 1.100 - - O PTHR11347
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X171
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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