DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and Pde10a

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_038945075.1 Gene:Pde10a / 63885 RGDID:68434 Length:1075 Species:Rattus norvegicus


Alignment Length:1207 Identity:240/1207 - (19%)
Similarity:401/1207 - (33%) Gaps:376/1207 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SSPVSSIAIPAARVPRHRL-----RHADRDQKRDHSSDGLVSSG-ELRDEFMGIDAQPRRESLNS 94
            :||...:| |..:.|...:     |...|.:.|..::.|..:.| .|..|.:|...:        
  Rat     2 ASPEERLA-PRPQAPLPEVGDEPGRGQVRLEPRRGAASGRSAVGLSLARELLGCGRE-------- 57

  Fly    95 CEVGSPGTMSSSLGKAGRLNSSRYPSGGAGAIGLSVMGNLVGTTTRKCVLTLDGYSYVIVAST-- 157
             |:.:|..:|.||..||..:    |:||.||:.:...|. .|....:....| .:|..:.:|:  
  Rat    58 -ELAAPPPLSRSLSPAGHAS----PAGGPGALSVLSAGG-CGWVAARAPWAL-AFSSPVPSSSFS 115

  Fly   158 -------------------------PESLPSKRDEASGGPGSSGGTSGAATSSSSSGGGAASGAA 197
                                     ||.||.:...|:.|.|..||      ...:.|||....|.
  Rat   116 SSWYFWPPPPLPPPPLVPSSSAFHLPERLPRREGAAAAGGGGGGG------GGDAGGGGGGQEAD 174

  Fly   198 SGSVGPASGTATGTGSASGGAGG-----VSTPAQEAASPTVSELSGSGSNATINGQVARHGSLTI 257
            ..||.|.|...:|.|| |||:||     :|...|....|     :.||.......::..|..   
  Rat   175 PLSVPPGSSHRSGGGS-SGGSGGRWRLFLSPAIQGLLLP-----ARSGPRPPPPPRLPLHPG--- 230

  Fly   258 IRRTNSRNFTQFDGQLASPSSTACSSTAPGIGFAQTPLSEPLAERLSFRASGGSNGSASAGD--- 319
            ..|.:|..|....|        .|....||         .....|..:|..|.:...|:|..   
  Rat   231 AHRADSLGFPGAGG--------GCPGLGPG---------SAAGGRTPWRPRGTALPLATAWPLLF 278

  Fly   320 SRSSNQGPSNSGPAASAAVKMQPS--SPNATN-----YLADNIQISSANLSQTEMVVGRDSADYT 377
            ......||||:   ||...::...  ||:.|:     ||:.:.|:....:|::   |..::.:..
  Rat   279 GSDMEDGPSNN---ASCFRRLTECFLSPSLTDEKVKAYLSLHPQVLDEFVSES---VSAETVEKW 337

  Fly   378 AMHSINVGVGNSFLRGDTDIPQESGHSFETPSNMSFTAGQWDTESLPPVDTPDALNKAAGRIRSL 442
            .....|..       .|...|:|.....:|  ||.....:.::.....:||..            
  Rat   338 LKRKNNKA-------EDEPSPKEVSRYQDT--NMQGVVYELNSYIEQRLDTGG------------ 381

  Fly   443 LRRMDHETVAYEDMQRNLHYAARV--LEAVFIDESREGCNGNCKNLNCSRHSHGRDDQQQDNNNS 505
                |:..:.|| :...:..|.:.  ....|:        |.|.|                    
  Rat   382 ----DNHLLLYE-LSSIIRIATKADGFALYFL--------GECNN-------------------- 413

  Fly   506 NRSCSLQEASPGGAGAGVTPGADNQDSIESRTKGVSQAPQTHSGPTGPPSNTSSETIAQPAPKLQ 570
                ||...:|.|...|                      |....|.||  .|...||:....|.:
  Rat   414 ----SLCVFTPPGMKEG----------------------QPRLIPAGP--ITQGTTISAYVAKSR 450

  Fly   571 PALETVRESVMEESPSKDPGDKGPPPPASTSTLTSQTTTSSSATAEPSAKAAESQAGSA------ 629
            ..|  :.|.::        ||:..|    ..|.....|...|....|...|.....|..      
  Rat   451 KTL--LVEDIL--------GDERFP----RGTGLESGTRIQSVLCLPIVTAIGDLIGILELYRHW 501

  Fly   630 GSSGSCSNPAAVHRQRRLRTPTWARSMSTNKTRLA---DEDDELSEVQPDAVPPEVREWLA---- 687
            |....|.:    |::.......|| |::.::.::.   .:..||::...|.........:|    
  Rat   502 GKEAFCLS----HQEVATANLAWA-SVAIHQVQVCRGLAKQTELNDFLLDVSKTYFDNIVAIDSL 561

  Fly   688 ----STFTRQMATSRR----------------------KSDEKPKF---RSVAHAIRAGI----- 718
                ..:.:.:..:.|                      :.:.||.|   :.:..:|..||     
  Rat   562 LEHIMIYAKNLVNADRCALFQVDHKNKELYSDLFDIGEEKEGKPVFKKTKEIRFSIEKGIAGQVA 626

  Fly   719 -----------FVDRMYRR------------------VSSSALTAFPPDVVRLLKNL-------- 746
                       :.|..:.|                  ||..::..    ||:::..:        
  Rat   627 RTGEVLNIPDAYADPRFNREVDLYTGYTTRNILCMPIVSRGSVIG----VVQMVNKISGSAFSKT 687

  Fly   747 DDWTFDVFAL-----------------TEAASGQVVKYVAY------------------------ 770
            |:..|.:||:                 :|......::.::|                        
  Rat   688 DENNFKMFAVFCALALHCANMYHRIRHSECIYRVTMEKLSYHSICTSEEWQGLMHFNLPARICRD 752

  Fly   771 -ELFNRYGSIHKFK-IAPGILEAFLHR-------VEEGYCRY---------RNPYHNNLHAVDVM 817
             |||  :..|..|: :.|||....:||       ..|..||:         |.||||..|||   
  Rat   753 IELF--HFDIGPFENMWPGIFVYMIHRSCGTSCFELEKLCRFIMSVKKNYRRVPYHNWKHAV--- 812

  Fly   818 QTIHYCLC-----NTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRAVL 877
             |:.:|:.     |.||   .||||....|:|.|.||.:|.|.:|::........|.||: .:.:
  Rat   813 -TVAHCMYAILQNNNGL---FTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYS-TSTM 872

  Fly   878 ENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQEATI 942
            |.||.|.:..:|:.:.:||.|.||..|:.::..::.:.::.||:..:|...|.:.::.......:
  Rat   873 EQHHFSQTVSILQLEGHNIFSTLSSSEYEQVLEIIRKAIIATDLALYFGNRKQLEEMYQTGSLNL 937

  Fly   943 DKQ----KVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPFSPLCDRN-NTL 1002
            ..|    :|:.|::..||:....|.|.|.......:..||:.:||..|:||:...|:.||: ...
  Rat   938 HNQSHRDRVIGLMMTACDLCSVTKLWPVTKLTANDIYAEFWAEGDEMKKLGIQPIPMMDRDKRDE 1002

  Fly  1003 VAESQICFIDFIVEPSMGVMSDMLELILAPIAPMNKS 1039
            |.:.|:.|.:.:..|....::.    ||.|..|:.|:
  Rat  1003 VPQGQLGFYNAVAIPCYTTLTQ----ILPPTEPLLKA 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 11/104 (11%)
PDEase_I 807..1026 CDD:278654 63/228 (28%)
Pde10aXP_038945075.1 GAF 382..525 CDD:396252 38/218 (17%)
GAF 558..713 CDD:214500 17/158 (11%)
PDEase_I 805..1037 CDD:395177 68/243 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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