DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and PDE1B

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_011536758.1 Gene:PDE1B / 5153 HGNCID:8775 Length:537 Species:Homo sapiens


Alignment Length:509 Identity:233/509 - (45%)
Similarity:325/509 - (63%) Gaps:47/509 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 TPTWARSMSTNKTR-LADEDDELSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAH 712
            |.:...::..::|| :.|.:|||.|::.||||.|||:|||||||:|.....|:::|||||||:.|
Human    64 TASLLEAVYIDETRQILDTEDELQELRSDAVPSEVRDWLASTFTQQARAKGRRAEEKPKFRSIVH 128

  Fly   713 AIRAGIFVDRMYRRVSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYG 777
            |::|||||:||:||..:|....:...|:..|||||.|.||||:|.:||....::.:.:||..|:.
Human   129 AVQAGIFVERMFRRTYTSVGPTYSTAVLNCLKNLDLWCFDVFSLNQAADDHALRTIVFELLTRHN 193

  Fly   778 SIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASL 842
            .|.:|||....|.:||..:|.||.:|:|||||.:||.||.||:|..|..||:::.|:::|:.|.:
Human   194 LISRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAII 258

  Fly   843 LAALLHDYEHTGTTNNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRE 907
            .||.:||||||||||:||:.:.||.|::||||:||||||.|:.|||:::||.||..:|:::||.|
Human   259 FAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLENHHISSVFRLMQDDEMNIFINLTKDEFVE 323

  Fly   908 LRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTM 972
            ||.|||||||.|||:.||||:|.|:..|. |...|||.|.|||:||..|||||.|||.||.|||.
Human   324 LRALVIEMVLATDMSCHFQQVKTMKTALQ-QLERIDKPKALSLLLHAADISHPTKQWLVHSRWTK 387

  Fly   973 LLLEEFFRQGDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMGVMSDMLELILAPIA--- 1034
            .|:||||||||.|.||||||||||||.:||||:|||.||||||||:..|::|:.|..:.|:|   
Human   388 ALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADED 452

  Fly  1035 PMNKSKPATLVEHETTANSTTNSAIVIPNSGITPSMDKPRDHRTEAKTTAAECLARKSVTGTTAS 1099
            ..:|::|:.....                    ||:|      .|......:.::.:|.      
Human   453 SKSKNQPSFQWRQ--------------------PSLD------VEVGDPNPDVVSFRST------ 485

  Fly  1100 KFNIPKPWLTCLVENKRIWKEQA---VKDAEARALATAAEEAAAAAAAEAEESK 1150
                   |:..:.|||:.|||:|   :.:..:....:..||.|..:.||.|.::
Human   486 -------WVKRIQENKQKWKERAASGITNQMSIDELSPCEEEAPPSPAEDEHNQ 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 34/55 (62%)
PDEase_I 807..1026 CDD:278654 136/218 (62%)
PDE1BXP_011536758.1 PDEase_I_N 82..138 CDD:285672 34/55 (62%)
PDEase_I 223..450 CDD:278654 138/227 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 304 1.000 Domainoid score I1377
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 529 1.000 Inparanoid score I1225
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D439875at33208
OrthoFinder 1 1.000 - - FOG0001902
OrthoInspector 1 1.000 - - otm41086
orthoMCL 1 0.900 - - OOG6_100946
Panther 1 1.100 - - O PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4957
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1111.000

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