DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and PDE1A

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_016859783.1 Gene:PDE1A / 5136 HGNCID:8774 Length:586 Species:Homo sapiens


Alignment Length:508 Identity:243/508 - (47%)
Similarity:333/508 - (65%) Gaps:46/508 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 RLADEDDELSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRR 726
            ||.|.:||||::|.|:||.|||:||||||||:|..:::|.:|||||||:.||::|||||:||||:
Human    73 RLLDTEDELSDIQTDSVPSEVRDWLASTFTRKMGMTKKKPEEKPKFRSIVHAVQAGIFVERMYRK 137

  Fly   727 VSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEA 791
            .......|:|..|:..||::|.|:||||||.||:....:|::.||||.||..|::|||....|..
Human   138 TYHMVGLAYPAAVIVTLKDVDKWSFDVFALNEASGEHSLKFMIYELFTRYDLINRFKIPVSCLIT 202

  Fly   792 FLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTT 856
            |...:|.||.:|:|||||.:||.||.||:||.:.:||:|:|||:|||.|.:.||.:|||||||||
Human   203 FAEALEVGYSKYKNPYHNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTT 267

  Fly   857 NNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDM 921
            ||||:.:.|:.|:|||||:||||||.||::||::|:|.|||.:||::::|:||.|||||||.|||
Human   268 NNFHIQTRSDVAILYNDRSVLENHHVSAAYRLMQEEEMNILINLSKDDWRDLRNLVIEMVLSTDM 332

  Fly   922 TNHFQQMKAMRQLLTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEK 986
            :.||||:|.:|..|...|. ||:.|.:||:||..|||||||.|.:|:||||.|:||||.|||.|.
Human   333 SGHFQQIKNIRNSLQQPEG-IDRAKTMSLILHAADISHPAKSWKLHYRWTMALMEEFFLQGDKEA 396

  Fly   987 ELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMGVMSDMLELILAP-IAPMNKSKPATLVEHETT 1050
            ||||||||||||.:|:||:|||.||||||||:..:::|..|.|:.| |...:|::.::.|    .
Human   397 ELGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTFSLLTDSTEKIVIPLIEEASKAETSSYV----A 457

  Fly  1051 ANSTTNSAIVIPNSGITPSMDKPRDHRTEAKTTAAECLARKSVTGTTASKFNIP---------KP 1106
            ::|||...:.|                       |:.|.|.:..|:.:.....|         |.
Human   458 SSSTTIVGLHI-----------------------ADALRRSNTKGSMSDGSYSPDYSLAAVDLKS 499

  Fly  1107 WLTCLV----ENKRIWKEQAVK----DAEARALATAAEEAAAAAAAEAEESKP 1151
            :...||    :||..|||.|.:    |.....:::..|:..|....|..|..|
Human   500 FKNNLVDIIQQNKERWKELAAQALSSDHVLYHVSSTIEQEYAFDRVELSEETP 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 35/55 (64%)
PDEase_I 807..1026 CDD:278654 137/218 (63%)
PDE1AXP_016859783.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 304 1.000 Domainoid score I1377
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21043
Inparanoid 1 1.050 529 1.000 Inparanoid score I1225
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D439875at33208
OrthoFinder 1 1.000 - - FOG0001902
OrthoInspector 1 1.000 - - otm41086
orthoMCL 1 0.900 - - OOG6_100946
Panther 1 1.100 - - LDO PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4957
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1212.000

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