DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and Pde8

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001163275.2 Gene:Pde8 / 37741 FlyBaseID:FBgn0266377 Length:1050 Species:Drosophila melanogaster


Alignment Length:1061 Identity:221/1061 - (20%)
Similarity:349/1061 - (32%) Gaps:383/1061 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 PLAERLSFRASGGSNGSASAGDSRSSNQGPSNSGPAASAAVKMQPSSPNATNY----LADNIQIS 358
            |...::..|.|...:.|:|||....|::..|::.|.|.|...:...|.:..|.    |.|:..|.
  Fly     6 PKFSKVFRRKSSAKSSSSSAGRENPSSEPDSDTEPYAIAIAAISDRSGDNRNERPRPLPDDDSIR 70

  Fly   359 SANLSQTEMVVGRDSADYTAMHSINVGVGNSFLRGDTDIPQESG-----------HSFETPSNMS 412
            |..:|              |.| :::.||.......|.:|...|           ...||.|..:
  Fly    71 SRLIS--------------AAH-LDLDVGLELASDSTAVPANGGIRPKSEGACPEMKVETISAAT 120

  Fly   413 FTAGQWDTESLPPVDTPDALNKAAGRI--------RSLLRRMDHETVAYE--------DMQRNLH 461
                     |.||   |..|:..:|.:        |:..:..:...:.||        |:...|.
  Fly   121 ---------SPPP---PRPLHGTSGPVAISLPFVGRNSSKTPEEMELEYEANVEAESRDIMTPLR 173

  Fly   462 YAARVLEAVF------------IDESREGCNGNCKNLNCSRHSHGRDDQQQDNNNSNRSCSLQEA 514
            ...|.|...|            |.|:....:.....|| :....|..|.:.:.|::       |.
  Fly   174 RNTRPLSVSFGGGGGRSALQPEIVEAIRSLDVPALRLN-NLSFDGSTDPKGERNHA-------EE 230

  Fly   515 SPGGAGAGVTPGADNQDSIESRTK--------------GVSQAPQTH---SGPTGPPSNTSS--- 559
            .|      :|||.|::||:..|.|              .:.:.|:.|   :|...||:....   
  Fly   231 EP------LTPGHDHEDSVVLRRKVNCLERKAHSLYERRLPRVPKLHLLVAGKKNPPTEEEEFRT 289

  Fly   560 ----------ETIAQPAPKLQPAL-----ETVRES--------------VMEESPSKDPGDKGPP 595
                      .|:..|.|.|:..|     :::.|:              |..:..:.|...|...
  Fly   290 FQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAITAACQRHQLDVTLVKSKEEALDTLQKSYA 354

  Fly   596 PPASTSTLTSQTTTSSSATAEPSAKAAESQAG-------------------------SAG----- 630
            .......:.....:|.:..||..|:......|                         .||     
  Fly   355 TAQCYHLIIIDARSSKNLDAEHIARTIRHTHGHHLTTIIAVCKKSFFEKDDVLIALLDAGVNRCV 419

  Fly   631 ----SSGSCS-----------NP-----------AAVHRQRR--LRTPTWARSMSTNKT--RLAD 665
                :...||           .|           .|:||.:.  |.|....|....|:.  ||.:
  Fly   420 AETTNLAMCSVELKQILHSIIRPHNVMSTQQALYTALHRLKEVVLITDDLLRIQYANRATERLLN 484

  Fly   666 E--DDELSEVQPDAVPPEVREWLASTFTRQ---------MATSRRKSDE---------------- 703
            .  |:.:|:...|....::     ||.:.|         :.|.||||.|                
  Fly   485 MRLDEIISKQLEDIFVSDL-----STISEQCKNIKEFDGILTVRRKSQEGIPMHVRVVPVACIGS 544

  Fly   704 -----------------------KPKF--RSVAHAIRAGIFVDRM-----YRRVSSSALTAFP-- 736
                                   :||.  |...|::|...|..|.     .||.|.:.||:.|  
  Fly   545 APTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPLE 609

  Fly   737 ----------------------------------------------------------------- 736
                                                                             
  Fly   610 APITKIINLLSQVQENCSADEARLIDKVLEFLKREGLYSPQMKEIRTDDPIATDLIGALLTGPSV 674

  Fly   737 -------------------------------PDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAY 770
                                           |.::.||.....|.||:|.|.|......:.|:..
  Fly   675 YSSRRSSNDSIIRTGSSTRTAAIVPAKMKSNPIIMELLDESLSWDFDIFKLEEITDYHPLLYLGM 739

  Fly   771 ELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTG-LMNWLT 834
            |:|.|:.......|...:.:|:|..:|..| |..|.|||:.||.||||.       || .:..||
  Fly   740 EMFRRFDVFATLNIDENVCKAWLAVIEAHY-RKSNTYHNSTHAADVMQA-------TGAFITQLT 796

  Fly   835 D--------LEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRAVLENHHASASFRL-LR 890
            :        :|...:|:||..||.:|.|.::.|...|....|:||||..|||||||:.:|:| |.
  Fly   797 NKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDALAVLYNDLTVLENHHAAITFKLTLG 861

  Fly   891 EDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQE------ATIDKQKVL- 948
            :|:.||..:|.:|.::..|..:|:|:|.|:||.||:.:.....:...:|      .|.::..:| 
  Fly   862 DDKINIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGGEEPRDHNPQTDEETSILM 926

  Fly   949 -SLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPF-SPLCDRNNTLVAESQICFI 1011
             .:::...|:|:||:.......|...:.||:|.|.|.||:..||. .|:.||....:.:|||.||
  Fly   927 RRMLIKVADVSNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCSIPKSQIGFI 991

  Fly  1012 DFIVEPSMGVMS---DMLELI 1029
            ::|::..|....   ||.:||
  Fly   992 EYIIQDMMHAWESFIDMPQLI 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 18/107 (17%)
PDEase_I 807..1026 CDD:278654 80/240 (33%)
Pde8NP_001163275.2 PAS 459..539 CDD:238075 18/84 (21%)
PAS_9 463..539 CDD:290162 18/80 (23%)
PDEase_I 775..1016 CDD:278654 83/245 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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