DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde1c and Pde9

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_727644.3 Gene:Pde9 / 32233 FlyBaseID:FBgn0259171 Length:1623 Species:Drosophila melanogaster


Alignment Length:1264 Identity:269/1264 - (21%)
Similarity:446/1264 - (35%) Gaps:382/1264 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 RDEASGGPGSSGGTSGAATSSSSSGGGAASGAASGSVGPASG----------------------- 206
            :|.......|..|:|.||.::|::...|.:.||:.:...:|.                       
  Fly     3 QDSGCSSSSSRRGSSSAAAATSTAATAAETAAAAAATTTSSSDEETLETLTIITTTITDSDIHAT 67

  Fly   207 TATGTGSASGGAGGVSTPAQEAASPTVSELSGSGSNATINGQVARHGSLTIIRRTNSR--NFTQF 269
            |.|.|..|||.|   :|.|..|.:.|::.|:...||:.|...       :.:...:|.  .:.:.
  Fly    68 TTTTTVIASGTA---TTAAAAATTATLATLATLASNSDIEDS-------SPVESEDSEECEYIEI 122

  Fly   270 DGQLASPSSTACSSTAPGIGFAQTPLSEPLAERLSFRASGGSNGSASAGDS----RSSN----QG 326
            |.|     :||...|:|                        |.||:|:|::    ||||    |.
  Fly   123 DCQ-----TTAQEGTSP------------------------SGGSSSSGNAVLLQRSSNNLQQQQ 158

  Fly   327 PSNSGPAASAAVKMQPSSP---NATNYLADNIQISS---------------ANLSQTEMVVGRDS 373
            ...........:::|.:..   ....|:|..::..|               ....|.:.::.|.|
  Fly   159 QQQQQQQQHLQLQLQQADERLLRKIGYIASRVRCLSKYYGDFRLVNPYSARRQRRQLQEILLRHS 223

  Fly   374 --------------ADYTA-----MHSINVGVGNSFL---------------------------- 391
                          |..||     :.:|:...|:|.:                            
  Fly   224 IFDPGKEHQRAIVLAAATAAIAGPLAAIDCVCGSSSISLEAVSSRSRSSELEDDHHEQDQVQEEQ 288

  Fly   392 -----RGDT-DIPQESGHSFETPSNMSFTAGQWDTESLPPVDTPDALNKAAGRIRSLLRRMDHET 450
                 :||| |..:|..|..|.|.....      .|..||.........|..|.:|         
  Fly   289 EQEQHQGDTEDNEEEQEHPSEKPERTDI------EEEPPPAIAVTTTTTATVRRKS--------- 338

  Fly   451 VAYEDMQRNLHYAARVLEAVFI--DESREGCNGNC-----------------KNLNCSRHSHGRD 496
                .....:...|.|..:|.:  ..|:..|:.|.                 .||...||.|.:.
  Fly   339 ----SSSSTISGTATVSGSVSVSASASQSFCSNNINLLEELLIQFYEEQDHRSNLTVIRHHHHQQ 399

  Fly   497 DQQQ-------DNNNSNRSC-SLQE----ASPGG-AGAGVTPGADNQDSIESRTKGVSQAPQTHS 548
            .||.       :|||:|.:| |:|.    ::|.. |.|..||..:     :..|.|.:   ..|.
  Fly   400 HQQHQQQQRITNNNNNNNNCNSIQNNNNMSNPAATAAATATPSVE-----QPATSGTT---NIHL 456

  Fly   549 GPTGPP--SNTSSETIAQPAPKLQPALE------TVRES-------------------------- 579
            .||..|  |:......|.....:|.||:      |::.:                          
  Fly   457 QPTSLPDGSDNPRRRRASDCSAVQAALQNQLHCITLKNNNCGKAMPFHRGSCGAAGEHLLAANSI 521

  Fly   580 ------VMEESPSKDPGDKGPPPPASTSTLTSQTTTSS-----------SATAEPSAKAAESQA- 626
                  ::.:|.|...||         :|.|:.|..||           |.....||...|:.| 
  Fly   522 ANRATIILSKSCSNVDGD---------ATATAATALSSTVGGGIGGIGGSIKMRASATDIETNAL 577

  Fly   627 ------------GSAGSSGSCSNPAAVHRQRRLRTPTWARSMSTNKTRLA---DEDD---ELSEV 673
                        |:.|::|:..|             .....:..|.|.:.   ::||   .:.::
  Fly   578 NGARDAIVASNNGNNGNNGNNGN-------------NEYSILQLNNTIIQCHFNDDDFRALVKDL 629

  Fly   674 QPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRRVSSSALTAFPPD 738
            :......|...||..: .|.:....||| ..||.:.|.             ||......|.|..:
  Fly   630 KRKVEYTERMNWLCLS-KRPLGPPHRKS-SLPKHQEVK-------------RRFLEICDTTFSEE 679

  Fly   739 VVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRY 803
            |...|:..   .||.:..::|.    |.::...:|...|.|.||.|....|..:|:.|   |..|
  Fly   680 VRAALRLP---AFDSYEWSDAD----VIHLMQTMFVELGFIEKFSIPVDTLREWLYEV---YKHY 734

  Fly   804 RN-PYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSET 867
            .. |:||..|...|.|.::.......|::.|.|||....|::.:.||.:|.|..|.:.:.:.:|.
  Fly   735 NEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILLVSCICHDLDHPGYNNIYQINARTEL 799

  Fly   868 ALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMR 932
            ||.|||.:.|||||.|.:||||...|.||..:.||:.|..:|..:|..:|.|||..|.:.:....
  Fly   800 ALRYNDISPLENHHCSIAFRLLEHPECNIFKNFSRDTFNNIREGIIRCILATDMARHNEILTQFM 864

  Fly   933 QLLTL----QEATIDKQKVLSLVL-HCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPF 992
            ::..:    ..|.|:   :|.::| ...|||:.|:...|...|...||:|||.|...||..|||.
  Fly   865 EITPIFDYSNRAHIN---LLCMILIKVADISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPV 926

  Fly   993 SPLCDRNNTLVAESQICFIDFIVEP---SMG-VMSDMLELILAPI-------APMNKSKPAT--- 1043
            :|..|.:......||:.||..::.|   ::| ::.::.|||:.|:       ..:|.::..|   
  Fly   927 TPFMDPDKVSKPGSQVRFIGLVLLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKS 991

  Fly  1044 LVEHETTANSTTNSAIVIPNSGI--TP-------SMDKPRDHRT-------------EAKTTAAE 1086
            :.:..|:|.|.:||..:..|:.:  ||       |:||.:.:..             ....|.:.
  Fly   992 VADSNTSATSDSNSGTIDSNAAMVSTPGGASDKLSLDKGQGNSQGSGGGGGGGGGGGAGGGTGSG 1056

  Fly  1087 CLARKSVTGTTASKFNIPKPWLTCLVENKRIWKEQAVKDAEARALATAAEEAAAAAA-------- 1143
            |  ..:..|:.:.:  :|:......|:::|....|      ..|..|:.:|....|:        
  Fly  1057 C--GSNAAGSVSPQ--MPRSGSGISVKSRRSIPSQ------KSASRTSVDEPGGMASELHDLPEG 1111

  Fly  1144 AEAEESKPETETADGEQSEPAAEPADGAA 1172
            :|:.:|:..||....|::.......:|::
  Fly  1112 SESGDSETATEVDVAEKTSKFKVDTEGSS 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 12/58 (21%)
PDEase_I 807..1026 CDD:278654 74/227 (33%)
Pde9NP_727644.3 PDEase_I 739..967 CDD:278654 75/230 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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