DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and Pde1a

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001153054.1 Gene:Pde1a / 18573 MGIID:1201792 Length:545 Species:Mus musculus


Alignment Length:519 Identity:242/519 - (46%)
Similarity:325/519 - (62%) Gaps:59/519 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 RLADEDDELSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGIFVDRMYRR 726
            ||.|.:||||::|.|:||.|||:||||||||:|...::|.:|||||||:.||::|||||:||||:
Mouse    73 RLLDTEDELSDIQTDSVPSEVRDWLASTFTRKMGMMKKKPEEKPKFRSIVHAVQAGIFVERMYRK 137

  Fly   727 VSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEA 791
            ........:|..|:..||.:|.|:||||||.||:....:|::.||||.||..|::|||....|.|
Mouse   138 NYHMVGLTYPAAVIVTLKEVDKWSFDVFALNEASGEHSLKFMIYELFTRYDLINRFKIPVSCLIA 202

  Fly   792 FLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTT 856
            |...:|.||.:::|||||.:||.||.||:||.:.:||:|:|||:|||.|.:.||.:|||||||||
Mouse   203 FAEALEVGYSKHKNPYHNLVHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTT 267

  Fly   857 NNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDM 921
            ||||:.:.|:.|:|||||:||||||.||::||::|:|.|||.:||::::|:||.|||||||.|||
Mouse   268 NNFHIQTRSDVAILYNDRSVLENHHVSAAYRLMQEEEMNILVNLSKDDWRDLRNLVIEMVLATDM 332

  Fly   922 TNHFQQMKAMRQLLTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLEK 986
            :.||||:|.:|..|...|. ||:.|.:||:||..|||||||.|.:|:||||.|:||||.|||.|.
Mouse   333 SGHFQQIKNIRNSLQQPEG-IDRAKTMSLILHAADISHPAKTWKLHYRWTMALMEEFFLQGDKEA 396

  Fly   987 ELGLPFSPLCDRNNTLVAESQICFIDFIVEPSMGVMSDMLELILAPIAPMNKSKPATLVEHETTA 1051
            ||||||||||||.:|:||:|||.||||||||:..:::|..|.|:.|           |:|..:.:
Mouse   397 ELGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTFSLLTDSTEKIVIP-----------LIEEASKS 450

  Fly  1052 NSTTNSAIVIPNSGITPSMDKPRDHRTEAKTTAAECLARKSVTGTTASKFNIP---------KPW 1107
            .|:        |.|.:.|......|       .|:.|.|.:..|:.......|         |.:
Mouse   451 QSS--------NYGASSSSTMIGFH-------VADSLRRSNTKGSVCDGSYAPDYSLSAVDLKSF 500

  Fly  1108 LTCLV----ENKRIWKEQAVKDAEARALATAAEEAAAAAAAEAEESKPETETADGEQSEPAAEP 1167
            ...||    :||..|||                   .||..|.:..|...|..:.|:......|
Mouse   501 KNNLVDIIQQNKERWKE-------------------LAAQGELDLHKNSEELGNTEEKHADTRP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 35/55 (64%)
PDEase_I 807..1026 CDD:278654 137/218 (63%)
Pde1aNP_001153054.1 Calmodulin-binding 24..44
PDEase_I_N 77..133 CDD:369905 35/55 (64%)
PDEase_I 218..434 CDD:365964 136/216 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..545 3/18 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 305 1.000 Domainoid score I1358
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21043
Inparanoid 1 1.050 526 1.000 Inparanoid score I1227
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0001902
OrthoInspector 1 1.000 - - otm43157
orthoMCL 1 0.900 - - OOG6_100946
Panther 1 1.100 - - LDO PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X171
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.970

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