DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and Pde5a

DIOPT Version :10

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_006233322.1 Gene:Pde5a / 171115 RGDID:620995 Length:865 Species:Rattus norvegicus


Alignment Length:340 Identity:95/340 - (27%)
Similarity:154/340 - (45%) Gaps:21/340 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   731 ALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYVAYELFNRYGSIHKFKIAPGILEAFLHR 795
            ||.|......:.|| :.|::|..|.|::..:.    .....:|.....:..|::...:|..::..
  Rat   532 ALAAAVVPSAQTLK-ITDFSFSDFELSDLETA----LCTIRMFTDLNLVQNFQMKHEVLCRWILS 591

  Fly   796 VEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFH 860
            |::.| |....|||..||.:..|.:...|....:.|.|||||..|.|:|||.||.:|.|..|::.
  Rat   592 VKKNY-RKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLETLALLIAALSHDLDHRGVNNSYI 655

  Fly   861 VMSGSETALLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLGTDMTNHF 925
            ..|....|.|| ..:.:|:||......:|......|||.||.||::....::.:.:|.||:..:.
  Rat   656 QRSEHPLAQLY-CHSTMEHHHFDQCLMVLNSPGNQILSGLSIEEYKTTLKIIKQAILATDLALYI 719

  Fly   926 QQMKAMRQLLTLQEAT----IDKQKVLSLVLHCCDISHPAKQWGVHHRWTMLLLEEFFRQGDLE- 985
            ::.....:|:...|.:    :.|:..|::::..||:|...|.|.:..|...|:..|||.|||.| 
  Rat   720 KRRGEFFELIRKNEFSFEDPLQKELFLAMLMTACDLSAITKPWPIQQRIAELVAAEFFDQGDRER 784

  Fly   986 KELGLPFSPLCDR-NNTLVAESQICFIDFI----VEPSMGVMSDMLELILAPIAPMNKSKPATLV 1045
            |||.:..:.|.:| ....:...|:.|||.|    .|....|..|.|.|:..  ...|:.|...|.
  Rat   785 KELNMEPADLMNREKKNKIPSMQVGFIDAICLQLYEALTHVSEDCLPLLDG--CRKNRQKWQALA 847

  Fly  1046 EHE--TTANSTTNSA 1058
            :.:  |..|..:..|
  Rat   848 DQQEKTLLNGESGQA 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 662..722 CDD:462497
PDEase_I 807..1027 CDD:459723 72/229 (31%)
Pde5aXP_006233322.1 GAF 154..311 CDD:214500
GAF 337..503 CDD:214500
PDEase_I 602..836 CDD:459723 74/236 (31%)
Blue background indicates that the domain is not in the aligned region.

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