DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde1c and pde7a

DIOPT Version :9

Sequence 1:NP_001137817.1 Gene:Pde1c / 34594 FlyBaseID:FBgn0264815 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_031760262.1 Gene:pde7a / 100498541 XenbaseID:XB-GENE-1013813 Length:480 Species:Xenopus tropicalis


Alignment Length:448 Identity:122/448 - (27%)
Similarity:200/448 - (44%) Gaps:71/448 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 PSAKAAESQAGSAGSSGS-----CSNPAAV---HRQRR--------LRTPTWARSMST------- 658
            |..|...|:.|:...|.|     |.||..:   |.:||        .:|..:.|.:.:       
 Frog    15 PVPKHVLSRRGAISFSSSSALFGCPNPRQLSQDHVKRRGAISYDSSDQTALYIRMLGSCVIFKQL 79

  Fly   659 ------NKTRLADEDDEL--------------SEVQPDAVPPEVREWLASTFTRQMATSRRKSDE 703
                  .::|...|.:..              ||::.......:|..|  :|.|.:.:||     
 Frog    80 SARDVRVRSRAGFESERRGSHPYIDFRILHSHSEIEISLSARNIRRLL--SFQRYLKSSR----- 137

  Fly   704 KPKFRSVAHAIRAGIFVDRMYRRVSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYV 768
              .||.|. |..:...:|..|...:..           :|:.:..|:||:|......:|..:..:
 Frog   138 --FFRGVT-AQNSLYILDDDYNGQAKC-----------MLEKVGSWSFDIFLFDRLTNGNSLVTL 188

  Fly   769 AYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQTIHYCLCNTGLMNWL 833
            .:.|.:.:|.|..|::....|..||..|:|.| ..:|||||.:||.||.|.::..|....|....
 Frog   189 TFHLLSHHGLIDHFQLDMVKLRRFLVMVQEDY-HSQNPYHNAVHAADVTQAMYCFLKEPKLAKSF 252

  Fly   834 TDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETALLYNDRAVLENHHASASFRLLREDEYNILS 898
            |..:|...|:||..||.:|.|...:|.:.:....|.||.:.:||||||..::..||||.  .:.:
 Frog   253 TPWDILLGLIAAATHDLDHPGVNQSFLIKTNHYLATLYKNTSVLENHHWRSAVGLLRES--GLFA 315

  Fly   899 HLSREEFRELRGLVIEMVLGTDMTNHFQQMKAMRQLLTLQEATIDKQK----VLSLVLHCCDISH 959
            |::.||.:.:.|.:..::|.||::...:.:...|..|...:..:|...    :|.:.|.|.||.:
 Frog   316 HMTLEERQHMEGQLGSIILATDISRQNEYLSQFRTHLDRGDLCLDNASDRLFILQMALKCADICN 380

  Fly   960 PAKQWGVHHRWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEP 1017
            |.:.|.:..:|:..:.||||.|||:|::..|..||||||..:.:|..||.||.::|||
 Frog   381 PCRTWELSKQWSEKVTEEFFYQGDVERKYKLDVSPLCDRQTSNIANIQIGFITYLVEP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde1cNP_001137817.1 PDEase_I_N 666..722 CDD:285672 13/69 (19%)
PDEase_I 807..1026 CDD:278654 74/215 (34%)
pde7aXP_031760262.1 PDEase_I 226..459 CDD:395177 74/215 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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