DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycY and LOC1279977

DIOPT Version :10

Sequence 1:NP_609519.1 Gene:CycY / 34593 FlyBaseID:FBgn0032378 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_319766.4 Gene:LOC1279977 / 1279977 VectorBaseID:AGAMI1_005133 Length:459 Species:Anopheles gambiae


Alignment Length:190 Identity:44/190 - (23%)
Similarity:58/190 - (30%) Gaps:86/190 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GNKNSCCAYSSPQS-------DRKSKDMPPVFEERI--------------------IQLGHPPHT 39
            |:.:|....||||.       |..:.|.....|:.|                    ...||  ..
Mosquito   247 GSSSSSSPLSSPQPTGVDSRLDHATVDDTNTLEDCISNGTLAASQIKTALKDCEVAFAAGH--EQ 309

  Fly    40 SQHQLDGHHGSASAVHLHHHHHGHNQQQ----------NQQ--------------------GGGG 74
            .|.||..||        |||||.|.|||          |::                    ..||
Mosquito   310 QQQQLHQHH--------HHHHHHHQQQQLHNPSWHSTTNERHEATVFSLPYRYRNIRFIFDPAGG 366

  Fly    75 DNYENQQNLQHISEREALEGEEDPSVDPTAATMFLERSKVENGGMTRKRSQQQIAQQAGS 134
            :|:..|.:... ||:|..|.:..||                :||....||.:  .:.|||
Mosquito   367 NNFVQQIDFLR-SEQEGNESDRAPS----------------DGGSNNDRSLE--LRHAGS 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycYNP_609519.1 CYCLIN_CCNY_like 228..324 CDD:410243
LOC1279977XP_319766.4 None
Blue background indicates that the domain is not in the aligned region.

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