DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF254

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_975011.3 Gene:ZNF254 / 9534 HGNCID:13047 Length:659 Species:Homo sapiens


Alignment Length:506 Identity:179/506 - (35%)
Similarity:252/506 - (49%) Gaps:15/506 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 CGKMFQFRYQLIVHRR---YHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            |.|..:..|:.:...|   .|:|:|.|.|:...:.|......|:|..|:.....:.|..|...|.
Human   156 CDKYLKVFYKFLNSNRPKIRHTEKKSFKCKKRVKLFCMLSHKTQHKSIYHREKSYKCKECGKTFN 220

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            .:::|..|.|.::.:||:.|....|:..:...|..|...|.||..::|:.|.:.|.|..::..|.
Human   221 WSSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKCEECGEAFNRSSNLTTHK 285

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            ..||||.|::|:.|.|:|........|...||.:.|::|:.|||.:.....|..|.|.||.|.|:
Human   286 IIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPY 350

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            :||.|||:||:....|.|.:.||||..::|..|.|.|.:...|..|...|.||..::|..|.|.|
Human   351 KCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGF 415

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            .|..:|..|...||||.|:||..|.|||.....:..|.|.||.|.|:||..|.|.|.....||.|
Human   416 NRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIWSSTLTRH 480

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|.|||:.|::|..|.|:|::...||.|..:|||:.|:|||.|.|.|.....|..|...|:.:.|
Human   481 KRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFNWSSTLTKHKIIHTEEKP 545

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.|..|.|.|.:...|.|| .|.|||::|:.||.|||||........|:..||.    .:|:.||
Human   546 YKCEKCGKAFKQSSILTNH-KRIHTGEKPYKCEECGKSFNRSSTFTKHKVIHTG----VKPYKCE 605

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHM---KMNH 725
            :|.|.|.....|..|.|.|:||:|:......|||    |...|:   |:.|
Human   606 ECGKAFFWSSTLTKHKRIHTGEQPYKWEKFGKAF----NRSSHLTTDKITH 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 158/425 (37%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 5/20 (25%)
ZNF254NP_975011.3 KRAB 13..73 CDD:214630
C2H2 Zn finger 184..204 CDD:275368 4/19 (21%)
C2H2 Zn finger 212..260 CDD:275368 12/47 (26%)
COG5048 264..625 CDD:227381 140/365 (38%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 9/19 (47%)
C2H2 Zn finger 380..400 CDD:275368 6/19 (32%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 548..568 CDD:275368 8/20 (40%)
C2H2 Zn finger 576..596 CDD:275368 8/19 (42%)
C2H2 Zn finger 604..624 CDD:275368 8/19 (42%)
C2H2 Zn finger 632..652 CDD:275368 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.950

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