DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF235

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_004225.3 Gene:ZNF235 / 9310 HGNCID:12866 Length:738 Species:Homo sapiens


Alignment Length:499 Identity:189/499 - (37%)
Similarity:274/499 - (54%) Gaps:6/499 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 CGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNT 290
            ||| ...:...:..|..|:.:|.:....|.:.|..|..|..|.::|:|.....|.......:.::
Human   241 CGK-DTLKVSPLTQRSIHTGQKTYQGNECEEAFNDSSSLELHKQVHLGKKSPACSTHEKDTSYSS 304

  Fly   291 SLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKH 355
            .:.......:..|.:.|..|.|.|::..:|..|.|.||||.|:.|..|.|:|.:..|:..|:..|
Human   305 GIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIH 369

  Fly   356 TGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCE 420
            |||.|:|||.|.|.|:|......|...|||:.|::|:||||.:|::.||..|.|.||.|.|::|.
Human   370 TGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCG 434

  Fly   421 ICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRK 485
            .|||.||...:...|...||.|.|::||.|.|.|:...:|.:|.|.||||.|::|..|.|.|:..
Human   435 DCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSA 499

  Fly   486 EHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQ 550
            ....:|.|.||||.||:|..|.|.|::..:...|.|.||||.|:||..|.|.|....:|.||.|.
Human   500 SSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRV 564

  Fly   551 HTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCC 615
            |||:.|::|..|.|.|::..:|..|..:|||:.|.||:.|||.|::..||..|.|.|:.:.|:.|
Human   565 HTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKC 629

  Fly   616 NVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCP 680
            :.|.|.|:::.:|..|.. .|||::||.||.|||.|.....|..|||.||.    |:|:.|::|.
Human   630 DTCGKAFSQRSNLQVHQI-IHTGEKPFKCEECGKEFSWSAGLSAHQRVHTG----EKPYTCQQCG 689

  Fly   681 KNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            |.|....|..:|.|.|:||:|:.|.:|.|.|.:|.:|..|.:::
Human   690 KGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVH 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 4/16 (25%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 1/19 (5%)
COG5048 300..723 CDD:227381 175/422 (41%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 10/19 (53%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF235NP_004225.3 KRAB A domain 6..47
KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
KRAB B domain 48..80
C2H2 Zn finger 266..285 CDD:275368 5/18 (28%)
COG5048 321..662 CDD:227381 145/341 (43%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
zinc finger domain 321..341 7/19 (37%)
zf-H2C2_2 333..358 CDD:290200 12/24 (50%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
zinc finger domain 349..369 6/19 (32%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
zinc finger domain 377..397 7/19 (37%)
zf-H2C2_2 389..414 CDD:290200 10/24 (42%)
C2H2 Zn finger 405..425 CDD:275368 10/19 (53%)
zinc finger domain 405..425 10/19 (53%)
zf-H2C2_2 417..442 CDD:290200 13/24 (54%)
C2H2 Zn finger 433..453 CDD:275368 7/19 (37%)
zinc finger domain 433..453 7/19 (37%)
zf-H2C2_2 448..469 CDD:290200 9/20 (45%)
C2H2 Zn finger 461..481 CDD:275368 8/19 (42%)
zinc finger domain 461..481 8/19 (42%)
zf-H2C2_2 476..498 CDD:290200 11/21 (52%)
C2H2 Zn finger 489..509 CDD:275368 6/19 (32%)
zinc finger domain 489..509 6/19 (32%)
zf-H2C2_2 501..526 CDD:290200 12/24 (50%)
C2H2 Zn finger 517..537 CDD:275368 6/19 (32%)
zinc finger domain 517..537 6/19 (32%)
zf-H2C2_2 529..553 CDD:290200 11/23 (48%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
zinc finger domain 545..565 8/19 (42%)
zf-H2C2_2 560..582 CDD:290200 11/21 (52%)
C2H2 Zn finger 573..593 CDD:275368 6/19 (32%)
zinc finger domain 573..593 6/19 (32%)
zf-H2C2_2 585..610 CDD:290200 12/24 (50%)
C2H2 Zn finger 601..621 CDD:275368 9/19 (47%)
zinc finger domain 601..621 9/19 (47%)
zf-H2C2_2 613..638 CDD:290200 10/24 (42%)
C2H2 Zn finger 629..649 CDD:275368 6/20 (30%)
zinc finger domain 629..649 6/20 (30%)
zf-H2C2_2 641..665 CDD:290200 12/24 (50%)
C2H2 Zn finger 657..677 CDD:275368 10/19 (53%)
zinc finger domain 657..677 10/19 (53%)
zf-H2C2_2 670..694 CDD:290200 12/27 (44%)
C2H2 Zn finger 685..705 CDD:275368 7/19 (37%)
zinc finger domain 685..705 7/19 (37%)
C2H2 Zn finger 713..733 CDD:275368 7/19 (37%)
zinc finger domain 713..733 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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