DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF496

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_116141.1 Gene:ZNF496 / 84838 HGNCID:23713 Length:587 Species:Homo sapiens


Alignment Length:183 Identity:61/183 - (33%)
Similarity:84/183 - (45%) Gaps:18/183 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 TGETPFKCTYCTKAFTRKDHMVNHVR-QHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRC 559
            |.:..:.|..|.|.|..:.:.:.|:| :...|.||:|:.|.:.|:..|.|..|:..|....|:||
Human   401 TSKKSYVCPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLESHEAQKPYRC 465

  Fly   560 SYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTR---------KEHLNNHMRQHSSDNPHCC 615
            ..|.|:|....||.:|.|:|.  .|.:.:..:|....         ||.|.|...:.|.   .||
Human   466 GACGKSFRLNSHLLSHRRIHL--QPDRLQPVEKREQAASEDADKGPKEPLENGKAKLSF---QCC 525

  Fly   616 NVCNKPFTRKEHLINHMSRCHTGD--RPFTCETCGKSFPLKGNLLFHQRSHTK 666
            . |.|.|.|.:||..|.|..|..|  |||.|..|.|||....:||.|:|.|.|
Human   526 E-CGKAFQRHDHLARHRSHFHLKDKARPFQCRYCVKSFTQNYDLLRHERLHMK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 61/183 (33%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368
C2H2 Zn finger 419..439 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 475..495 CDD:275368
C2H2 Zn finger 503..523 CDD:275368 6/20 (30%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 5/28 (18%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF496NP_116141.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
SCAN 50..126 CDD:280241
KRAB_A-box 222..259 CDD:143639
KRAB 223..275 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..282
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..399
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
COG5048 <427..>586 CDD:227381 54/157 (34%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
zf-C2H2 463..485 CDD:278523 9/21 (43%)
C2H2 Zn finger 465..485 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 488..513 4/24 (17%)
zf-C2H2 522..543 CDD:278523 9/24 (38%)
C2H2 Zn finger 524..543 CDD:275368 9/19 (47%)
zf-C2H2 553..575 CDD:278523 10/21 (48%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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