DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF397

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_006722621.1 Gene:ZNF397 / 84307 HGNCID:18818 Length:553 Species:Homo sapiens


Alignment Length:252 Identity:104/252 - (41%)
Similarity:148/252 - (58%) Gaps:1/252 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 ETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYC 478
            |.|:||::||.||.:....|.|...||||.|::|:.|.|.|:.:.:|:.|.|.|:||..:.||.|
Human   301 ERPYRCDVCGHSFKQHSSLTQHQRIHTGEKPYKCNQCGKAFSLRSYLIIHQRIHSGEKAYECSEC 365

  Fly   479 MKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEH 543
            .|.|.:...|:.|.:.||||...||..|.|||::..:::.|.|.||||.|::|..|.|||::...
Human   366 GKAFNQSSALIRHRKIHTGEKACKCNECGKAFSQSSYLIIHQRIHTGEKPYECNECGKTFSQSSK 430

  Fly   544 LTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHS 608
            |..|.|.|||:.|:.|:.|.|.|.:...|..|.|:|:|:.|::|..|.|.|:...:|..|.|.||
Human   431 LIRHQRIHTGERPYECNECGKAFRQSSELITHQRIHSGEKPYECSECGKAFSLSSNLIRHQRIHS 495

  Fly   609 SDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHT 665
            .:.|:.||.|.|.|.|...|:.| .|.|:||..:.|..|||:|..:..|:.|||.||
Human   496 GEEPYQCNECGKTFKRSSALVQH-QRIHSGDEAYICNECGKAFRHRSVLMRHQRVHT 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 104/252 (41%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF397XP_006722621.1 SCAN 46..139 CDD:128708
SCAN 46..134 CDD:280241
COG5048 <297..546 CDD:227381 99/245 (40%)
zf-C2H2 304..326 CDD:278523 8/21 (38%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
zf-H2C2_2 318..342 CDD:290200 10/23 (43%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
zf-H2C2_2 346..371 CDD:290200 11/24 (46%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
zf-H2C2_2 374..399 CDD:290200 12/24 (50%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-H2C2_2 402..427 CDD:290200 12/24 (50%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
zf-H2C2_2 431..455 CDD:290200 11/23 (48%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
zf-H2C2_2 458..482 CDD:290200 9/23 (39%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
zf-H2C2_2 486..511 CDD:290200 11/24 (46%)
C2H2 Zn finger 502..522 CDD:275368 9/20 (45%)
zf-C2H2 528..550 CDD:278523 9/21 (43%)
C2H2 Zn finger 530..550 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.000

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