DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF394

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_115540.2 Gene:ZNF394 / 84124 HGNCID:18832 Length:561 Species:Homo sapiens


Alignment Length:307 Identity:99/307 - (32%)
Similarity:147/307 - (47%) Gaps:34/307 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 DICKKSFTRKEHYVNHYMWHTGQTPHQCD---VCGKKYTRKEHLANHMRSHTNETPFRCEICGKS 425
            |:.|......|...|:.:    |...:|.   :|  ::..|.........|.|:       |.:|
Human   269 DVNKNGSIEGEDSKNNEL----QNSARCSNLVLC--QHIPKAERPTDSEEHGNK-------CKQS 320

  Fly   426 FSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVN 490
            |       :.:.||..: ||:.|  |........|....||...|.|::|..|.|:|.::..|..
Human   321 F-------HMVTWHVLK-PHKSD--SGDSFHHSSLFETQRQLHEERPYKCGNCGKSFKQRSDLFR 375

  Fly   491 HIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDS 555
            |.|.||||.|:.|..|.|:|::...:..|.|.||||.|:.|..|.:.|.:..||..|...|:.|.
Human   376 HQRIHTGEKPYGCQECGKSFSQSAALTKHQRTHTGEKPYTCLKCGERFRQNSHLNRHQSTHSRDK 440

  Fly   556 PHRCSYCKKTFTRKEHLTN---HVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNV 617
            ..:|..|.:|.    |::|   |.|||.|:.|:|||.|:|:|.::..|..|.|.|:.:.|:.|:|
Human   441 HFKCEECGETC----HISNLFRHQRLHKGERPYKCEECEKSFKQRSDLFKHHRIHTGEKPYGCSV 501

  Fly   618 CNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSH 664
            |.|.|.:...||.| .|.|||::|:.|..||:.|....:|:.|||.|
Human   502 CGKRFNQSATLIKH-QRIHTGEKPYKCLECGERFRQSTHLIRHQRIH 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 99/307 (32%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368 4/18 (22%)
C2H2 Zn finger 391..411 CDD:275368 3/22 (14%)
C2H2 Zn finger 419..439 CDD:275368 3/19 (16%)
C2H2 Zn finger 447..467 CDD:275368 4/19 (21%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 7/22 (32%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF394NP_115540.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
SCAN 60..170 CDD:128708
KRAB_A-box 155..214 CDD:322003
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..201
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..285 4/15 (27%)
C2H2 Zn finger 337..353 CDD:275368 3/15 (20%)
COG5048 356..>420 CDD:227381 25/63 (40%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
zf-C2H2 414..436 CDD:306579 6/21 (29%)
C2H2 Zn finger 416..436 CDD:275368 6/19 (32%)
C2H2 Zn finger 444..463 CDD:275368 7/22 (32%)
SFP1 <464..543 CDD:227516 31/79 (39%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..519 CDD:275368 9/20 (45%)
C2H2 Zn finger 527..547 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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