DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF34

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_085057.3 Gene:ZNF34 / 80778 HGNCID:13098 Length:560 Species:Homo sapiens


Alignment Length:606 Identity:184/606 - (30%)
Similarity:257/606 - (42%) Gaps:131/606 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VVTTGGTTITLGGPPPLPKS---EHKEDGKPP--------HGIEMYKVNIEDISQLFTYHEVFGK 70
            ::.|.|..::||..|..||.   ...|.|..|        .|.|..:||...:.....|.|:   
Human    64 MLETYGNLVSLGVGPAGPKPGVISQLERGDEPWVLDVQGTSGKEHLRVNSPALGTRTEYKEL--- 125

  Fly    71 IHGDVVNHQLAAAHGGQLPPPPPLPPQVTSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAA 135
                     .:....|:..|....|.:...|.:.:.                             
Human   126 ---------TSQETFGEEDPQGSEPVEACDHISKSE----------------------------- 152

  Fly   136 ASAGGGLPPATSGNGGQQVTVTTTSSSTSSGGSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGG 200
                |.|.......|.:.||:|...||..|||                                 
Human   153 ----GSLEKLVEQRGPRAVTLTNGESSRESGG--------------------------------- 180

  Fly   201 NGGGQNVAL----APDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTS 261
                 |:.|    .||..|     |.||||.:.|:.|..|..|:|.|..:|....:..|:     
Human   181 -----NLRLLSRPVPDQRP-----HKCDICEQSFEQRSYLNNHKRVHRSKKTNTVRNSGE----- 230

  Fly   262 QDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRS 326
                                   :|:.|..::...|..:..|...|:.|.|||....:|..|.|.
Human   231 -----------------------IFSANLVVKEDQKIPTGKKLHYCSYCGKTFRYSANLVKHQRL 272

  Fly   327 HTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQC 391
            ||.|.|::|..|.|.|::....:||.|.|:||.|:|||.|.|:|||:.:.:.|...|||:.|::|
Human   273 HTEEKPYKCDECGKAFSQSCEFINHRRMHSGEIPYRCDECGKTFTRRPNLMKHQRIHTGEKPYKC 337

  Fly   392 DVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTR 456
            ..|||.::....|..|.|.||.|.|::|..|||:||.......|...||||.|..|..|.|.||:
Human   338 GECGKHFSAYSSLIYHQRIHTGEKPYKCNDCGKAFSDGSILIRHRRTHTGEKPFECKECGKGFTQ 402

  Fly   457 KEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVR 521
            ..:|:.|.|.||||.|::|:.|.|.|.:|..||.|.|.||||.|::|..|.|.|::..|::.|.|
Human   403 SSNLIQHQRIHTGEKPYKCNECEKAFIQKTKLVEHQRSHTGEKPYECNDCGKVFSQSTHLIQHQR 467

  Fly   522 QHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHK 586
            .||||.|:||:.|.|.|.....|.:|.|.|.|:.|:|||.|||.|::..:|..|.|:|||:.|:|
Human   468 IHTGEKPYKCSECGKAFHNSSRLIHHQRLHHGEKPYRCSDCKKAFSQSTYLIQHRRIHTGEKPYK 532

  Fly   587 CEYCQKTFTRKEHLNNHMRQH 607
            |..|.|.|....::..|.|.|
Human   533 CSECGKAFRHSSNMCQHQRIH 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 1/19 (5%)
C2H2 Zn finger 279..299 CDD:275368 3/19 (16%)
COG5048 300..723 CDD:227381 132/308 (43%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF34NP_085057.3 KRAB 35..97 CDD:214630 10/32 (31%)
KRAB 35..74 CDD:279668 2/9 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..188 11/62 (18%)
COG5048 188..554 CDD:227381 151/399 (38%)
C2H2 Zn finger 197..217 CDD:275368 9/19 (47%)
zf-C2H2 251..273 CDD:278523 8/21 (38%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
zf-H2C2_2 265..290 CDD:290200 11/24 (46%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-C2H2 307..329 CDD:278523 9/21 (43%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
zf-H2C2_2 321..345 CDD:290200 9/23 (39%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 349..373 CDD:290200 11/23 (48%)
C2H2 Zn finger 365..385 CDD:275368 7/19 (37%)
zf-H2C2_2 378..402 CDD:290200 10/23 (43%)
C2H2 Zn finger 393..413 CDD:275368 8/19 (42%)
zf-H2C2_2 405..430 CDD:290200 12/24 (50%)
C2H2 Zn finger 421..441 CDD:275368 9/19 (47%)
zf-H2C2_2 434..458 CDD:290200 13/23 (57%)
C2H2 Zn finger 449..469 CDD:275368 7/19 (37%)
zf-H2C2_2 461..486 CDD:290200 13/24 (54%)
C2H2 Zn finger 477..497 CDD:275368 7/19 (37%)
zf-H2C2_2 493..514 CDD:290200 12/20 (60%)
C2H2 Zn finger 505..525 CDD:275368 9/19 (47%)
zf-H2C2_2 517..542 CDD:290200 12/24 (50%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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