DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF208

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_009084.2 Gene:ZNF208 / 7757 HGNCID:12999 Length:1280 Species:Homo sapiens


Alignment Length:539 Identity:194/539 - (35%)
Similarity:281/539 - (52%) Gaps:35/539 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATG--THVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            |.||  .:.|:.|||.|.:...|:.|:|.|:..||:.|:.||:.|:|...||:|..||.|...:.
Human   686 IHTGEKPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKSFSTFSVLTKHKVIHTGEKPYK 750

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
            |..|...:..:::|..|.|.|:.:||:.|..|.|.|.|...|..|.|.||.|.|::|:.|.|||:
Human   751 CEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFNRSAILIKHKRIHTDEKPYKCEECGKTFS 815

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHM 408
            :...:..|...|.||.|::|..|.|:|::......|.:.|||:.|::|:.|||.|.....|:.|.
Human   816 KVSTLTTHKAIHAGEKPYKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAYKWPSTLSYHK 880

  Fly   409 RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFT--------RKEH------ 459
            :.||.|.|::||.|||.||.....|.|.:.||||.|::|:.|.|.|:        :|.|      
Human   881 KIHTGEKPYKCEECGKGFSMFSILTKHEVIHTGEKPYKCEECGKAFSWLSVFSKHKKTHAGEKFY 945

  Fly   460 --------------LLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAF 510
                          |..|.:.||.|.|::...|.|.|:....|..|...||||.|:||..|.|||
Human   946 KCEACGKAYKSSSTLSYHKKIHTEEKPYKYEECGKGFSTFSILTKHKVIHTGEKPYKCEECGKAF 1010

  Fly   511 TRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNH 575
            ....:::.|.:.||||:|:||..|.|.|:....||.|...|.|:.|::|..|.|.|:....||.|
Human  1011 NWSSNLMEHKKIHTGETPYKCEECDKAFSWPSSLTEHKATHAGEKPYKCEECGKAFSWPSRLTEH 1075

  Fly   576 VRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDR 640
            ...|.|:.|:|||.|.|.|....:|..|.|.|:.:.|:.|..|.|.|:....|..| ...|||::
Human  1076 KATHAGEEPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKSFSTFSILTKH-KVIHTGEK 1139

  Fly   641 PFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACT 705
            |:.||.|||::.....|.:|::.||    :|:|:.||:|.|.|:....|..|...|:|||.:.|.
Human  1140 PYKCEECGKAYKWSSTLSYHKKIHT----VEKPYKCEECGKGFVMFSILAKHKVIHTGEKLYKCE 1200

  Fly   706 LCSKAFVERGNLKRHMKMN 724
            .|.||:.....|:.|.|::
Human  1201 ECGKAYKWPSTLRYHKKIH 1219

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 162/450 (36%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 8/47 (17%)
C2H2 Zn finger 475..495 CDD:275368 5/19 (26%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 7/19 (37%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
ZNF208NP_009084.2 KRAB 4..64 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 175..195 CDD:275368
C2H2 Zn finger 203..223 CDD:275368
COG5048 227..619 CDD:227381
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 259..279 CDD:275368
C2H2 Zn finger 287..307 CDD:275368
C2H2 Zn finger 315..335 CDD:275368
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
zf-H2C2_2 384..407 CDD:290200
C2H2 Zn finger 399..419 CDD:275368
C2H2 Zn finger 427..447 CDD:275368
zf-H2C2_2 439..463 CDD:290200
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 499..519 CDD:275368
zf-H2C2_2 511..536 CDD:290200
C2H2 Zn finger 527..547 CDD:275368
C2H2 Zn finger 555..575 CDD:275368
zf-H2C2_2 568..592 CDD:290200
C2H2 Zn finger 583..603 CDD:275368
zf-H2C2_2 596..619 CDD:290200
C2H2 Zn finger 611..631 CDD:275368
C2H2 Zn finger 639..659 CDD:275368