DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF180

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_037388.3 Gene:ZNF180 / 7733 HGNCID:12970 Length:692 Species:Homo sapiens


Alignment Length:479 Identity:176/479 - (36%)
Similarity:244/479 - (50%) Gaps:38/479 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 CGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNT 290
            |||..| ...||...|..::.|.:......|.|.....|..|.|||.||..|....|..|.....
Human   251 CGKPPQ-SIHLIQFTRTQ
TKDKSYGFSDRIQSFCHGTPLHIHEKIHGGGKTFDFKECGQVLNPKI 314

  Fly   291 SLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKH 355
            |.....:....:..:.|:    ..:....|..:.|:::.|.||.|..|.|:|:...|:|.|.|.|
Human   315 SHNEQQRIPFEESQYKCS----ETSHSSSLTQNMRNNSEEKPFECNQCGKSFSWSSHLVAHQRTH 375

  Fly   356 TGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCE 420
            |||.|:.|..|.|||:|..|.|:|...|||:.|::|:.|||.:::...|..|.|:||.|.|:.|.
Human   376 TGEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECN 440

  Fly   421 ICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRK 485
            .|||||.:......|...||||.|:.|:.|.|:|.:...|:.|.|.||||.|:.|:.|.|:|::.
Human   441 QCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECNQCGKSFSQS 505

  Fly   486 EHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQ 550
            ..||.|.|.||||.||:|..|.|:|:....:|.|.|.||||.|::|:.|.|:|.|..||..|.|.
Human   506 YKLVAHQRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGKSFNRSSHLVMHQRI 570

  Fly   551 HTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCC 615
            |||:.|:.|:.|.|:|::...|..|.|.|||:.|::|..|.|:|.:...|..|            
Human   571 HTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKSFRQSSCLTQH------------ 623

  Fly   616 NVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCP 680
                             .|.|||::||.|..|||:|.|...|:.|||:||.    |:||.|.:|.
Human   624 -----------------QRTHTGEKPFECNQCGKTFSLSARLIVHQRTHTG----EKPFTCIQCG 667

  Fly   681 KNFICKGHLVSHMRSHSGEKPHAC 704
            |.||....|:.|..:|:.||.:.|
Human   668 KAFINSYKLIRHQATHTEEKLYEC 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 7/16 (44%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 3/19 (16%)
COG5048 300..723 CDD:227381 155/405 (38%)
C2H2 Zn finger 307..327 CDD:275368 3/19 (16%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 1/20 (5%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 1/1 (100%)
ZNF180NP_037388.3 KRAB 72..133 CDD:214630
KRAB 72..111 CDD:279668
C2H2 Zn finger 249..267 CDD:275368 7/16 (44%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
COG5048 332..692 CDD:227381 154/397 (39%)
C2H2 Zn finger 355..375 CDD:275368 8/19 (42%)
zf-H2C2_2 367..392 CDD:290200 14/24 (58%)
C2H2 Zn finger 383..403 CDD:275368 9/19 (47%)
zf-H2C2_2 395..420 CDD:290200 11/24 (46%)
C2H2 Zn finger 411..431 CDD:275368 7/19 (37%)
zf-H2C2_2 424..448 CDD:290200 13/23 (57%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
zf-H2C2_2 455..476 CDD:290200 10/20 (50%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
zf-H2C2_2 483..504 CDD:290200 11/20 (55%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
zf-H2C2_2 508..531 CDD:290200 13/22 (59%)
C2H2 Zn finger 523..543 CDD:275368 7/19 (37%)
zf-H2C2_2 536..560 CDD:290200 12/23 (52%)
C2H2 Zn finger 551..571 CDD:275368 9/19 (47%)
zf-H2C2_2 563..588 CDD:290200 12/24 (50%)
C2H2 Zn finger 579..599 CDD:275368 7/19 (37%)
zf-H2C2_2 592..616 CDD:290200 11/23 (48%)
C2H2 Zn finger 607..627 CDD:275368 7/48 (15%)
zf-H2C2_2 620..643 CDD:290200 12/51 (24%)
C2H2 Zn finger 635..655 CDD:275368 10/19 (53%)
zf-H2C2_2 648..670 CDD:290200 12/25 (48%)
C2H2 Zn finger 663..683 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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