DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF165

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001363420.1 Gene:ZNF165 / 7718 HGNCID:12953 Length:485 Species:Homo sapiens


Alignment Length:279 Identity:85/279 - (30%)
Similarity:128/279 - (45%) Gaps:29/279 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 HVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPH----QCDVCGKKYTRKEHLANHMRSH 411
            ::.:.:||:.   ||||.:...|..:..    .:|::..    |.:..||..|.|..:...:.||
Human   215 YISEASGESQ---DICKSAGRVKRQWEK----ESGESQRLSSAQDEGFGKILTHKNTVRGEIISH 272

  Fly   412 --------------TNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLN 462
                          |::...:...|.:||.....|.||.:.:.||..|:   ..|:| :...|..
Human   273 DGCERRLNLNSNEFTHQKSCKHGTCDQSFKWNSDFINHQIIYAGEKNHQ---YGKSF-KSPKLAK 333

  Fly   463 HVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGES 527
            |....:|:..|:|:.|.|.|.....|..|.|.||||..::|..|.|:|.....:..|.|.||||.
Human   334 HAAVFSGDKTHQCNECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGER 398

  Fly   528 PHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQK 592
            |..|..|.:.|....||..|.|.||.:.|:.||.|.|||....||..|.|:|||:.|::|..|.:
Human   399 PFGCKECGRAFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGR 463

  Fly   593 TFTRKEHLNNHMRQHSSDN 611
            .|::..:|:.|.|.|..:|
Human   464 AFSQSSNLSQHQRIHMREN 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 85/279 (30%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 0/3 (0%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 4/19 (21%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 4/19 (21%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 10/19 (53%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF165NP_001363420.1 SCAN 45..157 CDD:128708
C2H2 Zn finger 297..314 CDD:275368 6/16 (38%)
zf-C2H2 344..366 CDD:333835 8/21 (38%)
C2H2 Zn finger 346..366 CDD:275368 7/19 (37%)
COG5048 370..>431 CDD:227381 21/60 (35%)
zf-C2H2 372..394 CDD:333835 6/21 (29%)
C2H2 Zn finger 374..394 CDD:275368 6/19 (32%)
C2H2 Zn finger 402..422 CDD:275368 7/19 (37%)
COG5048 426..>479 CDD:227381 21/52 (40%)
C2H2 Zn finger 430..450 CDD:275368 10/19 (53%)
C2H2 Zn finger 458..478 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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