DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF84

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001120844.1 Gene:ZNF84 / 7637 HGNCID:13159 Length:738 Species:Homo sapiens


Alignment Length:507 Identity:222/507 - (43%)
Similarity:296/507 - (58%) Gaps:8/507 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 IATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCI 280
            ||.|   |..|||.|..:.|.|.|.|.|:..||:.|..||:.|:....||.|.:.|.|...:.|.
Human   233 IAFG---CGNCGKTFPQKSQFITHHRTHTGEKPYNCSQCGKAFSQKSQLTSHQRTHTGEKPYECG 294

  Fly   281 VCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRK 345
            .|...|:..:.|..|.:.|:.:||:.|..|.:.|:.|.:|.||.|.||||.||.|:.|.|.|:||
Human   295 ECGKAFSRKSHLISHWRTHTGEKPYGCNECGRAFSEKSNLINHQRIHTGEKPFECRECGKAFSRK 359

  Fly   346 EHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRS 410
            ..:|.|.|.|||..|..|..|:|:|..|...:.|...|||:.|::|..|.|.:..:..|.||.|:
Human   360 SQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIRHQTIHTGEKPYECSECRKAFRERSSLINHQRT 424

  Fly   411 HTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRC 475
            ||.|.|..|..|||:||:|.|..:|.:.||||.|..|..|.|.|:||..|:.|.|.||||.|:.|
Human   425 HTGEKPHGCIQCGKAFSQKSHLISHQMTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYEC 489

  Fly   476 SYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTR 540
            |.|.|.|:.|..|.||.|.||||.|:.|:.|.|||.:|.|:::|.|.||||.|::|:.|.|.|..
Human   490 SECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGE 554

  Fly   541 KEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMR 605
            |..|..|.|.|||:.|:.|..|:|.|::|..|..|.|:|||:.|::|..|:|.|..|..|..|:|
Human   555 KSSLATHQRTHTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFFEKSELIRHLR 619

  Fly   606 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEM 670
            .|:.:.|:.||.|.|.|..|..|||| .|.|||::||.|..|||:|..|.:|:.|||:||.    
Human   620 THTGEKPYECNECRKAFREKSSLINH-QRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTG---- 679

  Fly   671 ERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMK 722
            |:|:.|.:|.|.|..|..||:|.|.|:||||:.|..|.|||.::..|..|.:
Human   680 EKPYGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQR 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 192/423 (45%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 10/19 (53%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 11/20 (55%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 9/19 (47%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF84NP_001120844.1 KRAB 9..68 CDD:214630
C2H2 Zn finger 209..229 CDD:275368
C2H2 Zn finger 237..257 CDD:275368 9/19 (47%)
C2H2 Zn finger 265..285 CDD:275368 7/19 (37%)
zf-H2C2_2 278..302 CDD:316026 8/23 (35%)
C2H2 Zn finger 293..313 CDD:275368 5/19 (26%)
COG5048 317..724 CDD:227381 190/411 (46%)
C2H2 Zn finger 321..341 CDD:275368 8/19 (42%)
C2H2 Zn finger 349..369 CDD:275368 9/19 (47%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
C2H2 Zn finger 405..425 CDD:275368 7/19 (37%)
C2H2 Zn finger 433..453 CDD:275368 9/19 (47%)
C2H2 Zn finger 461..481 CDD:275368 9/19 (47%)
C2H2 Zn finger 489..509 CDD:275368 10/19 (53%)
C2H2 Zn finger 517..537 CDD:275368 9/19 (47%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
C2H2 Zn finger 573..593 CDD:275368 8/19 (42%)
C2H2 Zn finger 601..621 CDD:275368 8/19 (42%)
C2H2 Zn finger 629..649 CDD:275368 11/20 (55%)
C2H2 Zn finger 657..677 CDD:275368 10/19 (53%)
C2H2 Zn finger 685..705 CDD:275368 9/19 (47%)
C2H2 Zn finger 713..733 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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