DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZSCAN20

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001364305.1 Gene:ZSCAN20 / 7579 HGNCID:13093 Length:1043 Species:Homo sapiens


Alignment Length:357 Identity:133/357 - (37%)
Similarity:198/357 - (55%) Gaps:12/357 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 EHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRS 410
            |.:::|...:..|.|::||.|.|||:|..|::.|...|||:.|::|..|||.::.:.:|..|.|.
Human   695 EKLIDHQGLYLAEKPYKCDTCMKSFSRSSHFIAHQRIHTGEKPYKCLECGKNFSDRSNLNTHQRI 759

  Fly   411 HTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRC 475
            ||.|.|::|..||||||...:...|...||||.|::|..|.|:|.:..:||.|.|.|.|.:|.:|
Human   760 HTGEKPYKCLECGKSFSDHSNLITHQRIHTGEKPYKCGECWKSFNQSSNLLKHQRIHLGGNPDQC 824

  Fly   476 SYCMKTFTRKEHLVNHIRQHTGET-PFKCTYCTKAFTRK-DHMVNHVRQHTGESPHKCTYCTKTF 538
            |.....|.:......|.|..|.|| |.:....:|..... .|..|     :||..::|:.|.::|
Human   825 SEPGGNFAQSPSFSAHWRNSTEETAPEQPQSISKDLNSPGPHSTN-----SGEKLYECSECGRSF 884

  Fly   539 TRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNH 603
            ::...|.:|.|.|||:.|:.|:.|.|:|::...|.||.|.|||:.|:||..|.|.|:.:..|..|
Human   885 SKSSALISHQRIHTGEKPYECAECGKSFSKSSTLANHQRTHTGEKPYKCVDCGKCFSERSKLITH 949

  Fly   604 MRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            .|.|:.:.|:.|..|.|.|..:.:||.| .|.|||::|:.|..|||.|....:|:.|||.||.  
Human   950 QRVHTGEKPYKCLECGKFFRDRSNLITH-QRIHTGEKPYKCRECGKCFNQSSSLIIHQRIHTG-- 1011

  Fly   669 EMERPFACEKCPKNFICKGHLVSHMRSHSGEK 700
              |:|:.|.:|.|:|....|..:|.|:|:|.|
Human  1012 --EKPYKCTECGKDFNNSSHFSAHRRTHAGGK 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 133/357 (37%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 2/8 (25%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 5/19 (26%)
C2H2 Zn finger 503..523 CDD:275368 3/20 (15%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368
ZSCAN20NP_001364305.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..49
SCAN 47..132 CDD:396558
Myb_DNA-bind_4 323..404 CDD:404682
Myb_DNA-bind_4 483..564 CDD:404682
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 661..692
COG5048 699..>1029 CDD:227381 126/339 (37%)
C2H2 Zn finger 712..732 CDD:275368 9/19 (47%)
C2H2 Zn finger 740..760 CDD:275368 7/19 (37%)
C2H2 Zn finger 768..788 CDD:275368 8/19 (42%)
C2H2 Zn finger 796..816 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 835..873 10/42 (24%)
C2H2 Zn finger 877..897 CDD:275368 6/19 (32%)
C2H2 Zn finger 905..925 CDD:275368 8/19 (42%)
C2H2 Zn finger 933..953 CDD:275368 7/19 (37%)
C2H2 Zn finger 961..981 CDD:275368 8/20 (40%)
C2H2 Zn finger 989..1009 CDD:275368 9/19 (47%)
C2H2 Zn finger 1017..1037 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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