DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF182

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001171570.1 Gene:ZNF182 / 7569 HGNCID:13001 Length:639 Species:Homo sapiens


Alignment Length:507 Identity:197/507 - (38%)
Similarity:279/507 - (55%) Gaps:61/507 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 CGKMFQFRYQLIVHRRYHSE-------RKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCF 283
            |.|:|           :|:|       .||:..:.||:|....:.|:.|.:|..|          
Human   187 CAKLF-----------FHTEYEKTNPGMKPYGYKECGKGLRRKKGLSLHQRIKNG---------- 230

  Fly   284 NVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHM 348
                              :|||.||.|:|||::|.||..|:|:||||.||.|..|.|.|::|..:
Human   231 ------------------EKPFECTACRKTFSKKSHLIVHWRTHTGEKPFGCTECGKAFSQKSQL 277

  Fly   349 VNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTN 413
            :.|:|.||||.|..|..|.|:|..|...:.||..|||:.|::|:.|||.:|:|.:|..|.::||.
Human   278 IIHLRTHTGERPFECPECGKAFREKSTVIIHYRTHTGEKPYECNECGKAFTQKSNLIVHQKTHTG 342

  Fly   414 ETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYC 478
            |..:.|..||:||.:|.....|...|||:.||.|:.|.|||:.|..|:.|.|.||||.||:|:.|
Human   343 EKTYECTKCGESFIQKLDLIIHHSTHTGKKPHECNECKKTFSDKSTLIIHQRTHTGEKPHKCTEC 407

  Fly   479 MKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEH 543
            .|:|..|..|:.|.|.||||.|::|..|.|.||:|.::..|.|.|:||.|.:|..|.|.|::|.:
Human   408 GKSFNEKSTLIVHQRTHTGEKPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEKAFSQKSY 472

  Fly   544 LTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHS 608
            |..|.|.|||:.|:.|:.|:|.|::|.:|..|.|.||.:.|:||..|.|.|..|..|..|.|.|:
Human   473 LMLHQRGHTGEKPYECNECEKAFSQKSYLIIHQRTHTEEKPYKCNECGKAFREKSKLIIHQRIHT 537

  Fly   609 SDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERP 673
            .:.|:.|.||.|.|::|..||.| .|.|||::|:.|..|||:|..|.....|||:||.    |:|
Human   538 GEKPYECPVCWKAFSQKSQLIIH-QRTHTGEKPYACTECGKAFREKSTFTVHQRTHTG----EKP 597

  Fly   674 FACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNH 725
            :.|.:|.|.|..|.:|:.|.|:|:|:|.|.          ||:.::...|.|
Human   598 YKCTECGKAFTQKSNLIVHQRTHAGKKAHG----------RGHTRKSKFMAH 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 3/16 (19%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 0/19 (0%)
COG5048 300..723 CDD:227381 181/422 (43%)
C2H2 Zn finger 307..327 CDD:275368 11/19 (58%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 10/20 (50%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 2/17 (12%)
ZNF182NP_001171570.1 KRAB 27..85 CDD:214630
KRAB 27..66 CDD:279668
COG5048 147..553 CDD:227381 159/404 (39%)
C2H2 Zn finger 209..228 CDD:275368 5/18 (28%)
C2H2 Zn finger 236..256 CDD:275368 11/19 (58%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 277..299 CDD:290200 10/21 (48%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
zf-H2C2_2 308..329 CDD:290200 10/20 (50%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
zf-H2C2_2 332..357 CDD:290200 10/24 (42%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
zf-C2H2 374..396 CDD:278523 10/21 (48%)
C2H2 Zn finger 376..396 CDD:275368 9/19 (47%)
zf-H2C2_2 389..412 CDD:290200 12/22 (55%)
C2H2 Zn finger 404..424 CDD:275368 8/19 (42%)
zf-H2C2_2 417..441 CDD:290200 12/23 (52%)
C2H2 Zn finger 432..452 CDD:275368 8/19 (42%)
zf-H2C2_2 444..469 CDD:290200 10/24 (42%)
C2H2 Zn finger 460..480 CDD:275368 8/19 (42%)
zf-H2C2_2 472..497 CDD:290200 11/24 (46%)
C2H2 Zn finger 488..508 CDD:275368 8/19 (42%)
zf-H2C2_2 500..523 CDD:290200 10/22 (45%)
C2H2 Zn finger 516..536 CDD:275368 8/19 (42%)
zf-H2C2_2 529..553 CDD:290200 10/23 (43%)
C2H2 Zn finger 544..564 CDD:275368 10/20 (50%)
zf-H2C2_2 557..579 CDD:290200 12/22 (55%)
C2H2 Zn finger 572..592 CDD:275368 9/19 (47%)
zf-H2C2_2 587..609 CDD:290200 11/25 (44%)
C2H2 Zn finger 600..620 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 619..639 7/29 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.950

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