DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF12

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_057349.2 Gene:ZNF12 / 7559 HGNCID:12902 Length:697 Species:Homo sapiens


Alignment Length:576 Identity:198/576 - (34%)
Similarity:284/576 - (49%) Gaps:57/576 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 GNGGGQNVALAPDGTP---IATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQG---- 257
            ||..|:...:..:..|   ||....:||.|.|......:.|.....::..|...|..||:.    
Human   114 GNVPGKTFDVETNPVPSRKIAYKNSLCDSCEKCLTSVSEYISSDGSYARMKADECSGCGKSLLHI 178

  Fly   258 --------------------FTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKR---- 298
                                :|.::: :.:.||.|....|..|.|...|..:|....||:.    
Human   179 KLEKTHPGDQAYEFNQNGEPYTLNEE-SLYQKIRILEKPFEYIECQKAFQKDTVFVNHMEEKPYK 242

  Fly   299 ----------------HSTD----KPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
                            |.|.    ||:.|:.|.|:|.:|.....|.|:||||.|:.|..|.|:|.
Human   243 WNGSEIAFLQMSDLTVHQTSHMEMKPYECSECGKSFCKKSKFIIHQRTHTGEKPYECNQCGKSFC 307

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHM 408
            :|..:..|.|.||||.|:.|:.|.|:|.:|.|.:.|...|:|:.|::|..|||.:.:|.||..|.
Human   308 QKGTLTVHQRTHTGEKPYECNECGKNFYQKLHLIQHQRTHSGEKPYECSYCGKSFCQKTHLTQHQ 372

  Fly   409 RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473
            |:|:.|.|:.|..|||:||:|....:|...|||...::|..|.|.|.||..|..|:|.||||.|:
Human   373 RTHSGERPYVCHDCGKTFSQKSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHLRTHTGEKPY 437

  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTF 538
            .|:.|.|.|:|..:|..|.|.|:||.|::|..|.|.|.....::.|.|.||||.|::|..|.|.|
Human   438 ECNECGKFFSRLSYLTVHYRTHSGEKPYECNECGKTFYLNSALMRHQRVHTGEKPYECNECGKLF 502

  Fly   539 TRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNH 603
            ::..:||.|.|.|:|..|:.||.|.|||.:...|..|.|:|.|:.|::|..|.|.|::..:|..|
Human   503 SQLSYLTIHHRTHSGVKPYECSECGKTFYQNSALCRHRRIHKGEKPYECYICGKFFSQMSYLTIH 567

  Fly   604 MRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            .|.||.:.|:.|:.|.|.|.:...|..| .|.|||::.:.|..|||.|.....|..|.|.|:.  
Human   568 HRIHSGEKPYECSECGKTFCQNSALNRH-QRTHTGEKAYECYECGKCFSQMSYLTIHHRIHSG-- 629

  Fly   669 EMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
              |:||.|.:|.|.|....:|..|.|:||||||:.||.|.|.|..:.....|.:::
Human   630 --EKPFECNECGKAFSRMSYLTVHYRTHSGEKPYECTECGKKFYHKSAFNSHQRIH 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 251..271 CDD:275368 5/43 (12%)
C2H2 Zn finger 279..299 CDD:275368 6/39 (15%)
COG5048 300..723 CDD:227381 171/426 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
ZNF12NP_057349.2 KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
C2H2 Zn finger 271..291 CDD:275368 7/19 (37%)
zf-H2C2_2 287..306 CDD:290200 10/18 (56%)
C2H2 Zn finger 299..319 CDD:275368 7/19 (37%)
COG5048 307..683 CDD:227381 152/380 (40%)
zf-H2C2_2 312..334 CDD:290200 10/21 (48%)
C2H2 Zn finger 327..347 CDD:275368 7/19 (37%)
zf-H2C2_2 339..362 CDD:290200 9/22 (41%)
C2H2 Zn finger 355..375 CDD:275368 9/19 (47%)
zf-H2C2_2 367..392 CDD:290200 12/24 (50%)
C2H2 Zn finger 383..403 CDD:275368 8/19 (42%)
C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
zf-H2C2_2 451..474 CDD:290200 10/22 (45%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
zf-H2C2_2 479..504 CDD:290200 11/24 (46%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
zf-H2C2_2 538..560 CDD:290200 9/21 (43%)
C2H2 Zn finger 551..571 CDD:275368 7/19 (37%)
zf-H2C2_2 563..586 CDD:290200 9/22 (41%)
zf-C2H2 577..599 CDD:278523 7/22 (32%)
C2H2 Zn finger 579..599 CDD:275368 7/20 (35%)
zf-H2C2_2 591..616 CDD:290200 11/25 (44%)
C2H2 Zn finger 607..627 CDD:275368 8/19 (42%)
zf-H2C2_2 619..644 CDD:290200 11/28 (39%)
C2H2 Zn finger 635..655 CDD:275368 7/19 (37%)
zf-H2C2_2 647..670 CDD:290200 13/22 (59%)
C2H2 Zn finger 663..683 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.860

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