DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF878

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_016882684.1 Gene:ZNF878 / 729747 HGNCID:37246 Length:567 Species:Homo sapiens


Alignment Length:492 Identity:163/492 - (33%)
Similarity:241/492 - (48%) Gaps:32/492 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 HSERKPFMCQVCGQGFTTSQDLTRHGKIHI------------GGPMFTCIVCFNVFANNTSLERH 295
            |...:..:.::.|:..:.|::..:||::..            |...:...||..:....:||.||
Human    92 HQNPRRNLRRLIGERLSESKESHQHGEVLTQVPDDTLKKKTPGVQSYESSVCGEIGIGLSSLNRH 156

  Fly   296 MKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETP 360
            :               :.|:....|..|.|:||||.|:.|:.|.|.|.....:..|.|.|:.:.|
Human   157 L---------------RAFSYSSSLAIHGRTHTGEKPYECKECGKAFRFPSSVRRHERIHSAKKP 206

  Fly   361 HRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKS 425
            :.|..|.|:|:.......|...|:.:.|::|..|||..:.......|||.||.|.|.:|.||||:
Human   207 YECKQCGKAFSFPSSVRRHERIHSAKKPYECKQCGKALSYLVSFQTHMRMHTGERPHKCNICGKA 271

  Fly   426 FSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVN 490
            |........|...||||..::|..|.|.|........|.|.|:||.|:.|:.|.|.|...::|..
Human   272 FFSPSSLKRHEKSHTGEKRYKCKQCDKAFNCPSSFQYHERTHSGEKPYECTQCRKAFRSVKYLRV 336

  Fly   491 HIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDS 555
            |.|:||||.|::|..|.|.|........|.:.||||.|::|..|.|.|:..:.|..|.|.|||:.
Human   337 HERKHTGEKPYECKLCGKGFISSTSFRYHEKTHTGEKPYECKKCVKAFSFVKDLRIHERTHTGEK 401

  Fly   556 PHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNK 620
            |..|..|.||||.......|.|.|||:.|::|:.|.|.|.....|..|:|.|:.:.|:.|..|.|
Human   402 PFECKQCGKTFTSSNSFHYHERTHTGEKPYECKQCGKAFRSASVLQKHIRTHTGEKPYGCKQCGK 466

  Fly   621 PFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFIC 685
            .|.....|..| .|.|||::|:.|:.|||:|....::.:|:|:||.    |:|:.|::|.|.||.
Human   467 VFRVASQLKMH-ERTHTGEKPYECKQCGKAFISSNSIRYHKRTHTG----EKPYKCKQCGKAFIS 526

  Fly   686 KGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMK 722
            ....:.|.|.|:||||:.|..|.|||.....|::|::
Human   527 SNSFLYHERIHTGEKPYECKQCGKAFRSASILQKHVR 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 163/492 (33%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 151/423 (36%)
C2H2 Zn finger 307..327 CDD:275368 4/19 (21%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 7/20 (35%)
C2H2 Zn finger 644..664 CDD:275368 7/19 (37%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF878XP_016882684.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.950

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