Sequence 1: | NP_001245993.1 | Gene: | crol / 34592 | FlyBaseID: | FBgn0020309 | Length: | 962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006506667.1 | Gene: | Prdm5 / 70779 | MGIID: | 1918029 | Length: | 630 | Species: | Mus musculus |
Alignment Length: | 428 | Identity: | 139/428 - (32%) |
---|---|---|---|
Similarity: | 204/428 - (47%) | Gaps: | 17/428 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 223 CDICGKMFQFRYQLIVHRRYHSERKPF-------MCQVCGQGFTTSQDLTRHGKIHIGGPMFTCI 280
Fly 281 V--CFNVFANNTSLERHMKRHSTDKP---FACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAK 340
Fly 341 TFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLA 405
Fly 406 NHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVR-QHTG 469
Fly 470 ESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYC 534
Fly 535 TKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEH 599
Fly 600 LNNHMRQHSSDNPHC-CNVCNKPFTRKEHLINHMSRCH 636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crol | NP_001245993.1 | C2H2 Zn finger | 223..243 | CDD:275368 | 8/19 (42%) |
C2H2 Zn finger | 251..271 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 279..299 | CDD:275368 | 5/21 (24%) | ||
COG5048 | 300..723 | CDD:227381 | 118/342 (35%) | ||
C2H2 Zn finger | 307..327 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 335..355 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 363..383 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 391..411 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 419..439 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 447..467 | CDD:275368 | 9/20 (45%) | ||
C2H2 Zn finger | 475..495 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 503..523 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 531..551 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 559..579 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 587..607 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 615..636 | CDD:275368 | 9/20 (45%) | ||
C2H2 Zn finger | 644..664 | CDD:275368 | |||
C2H2 Zn finger | 676..696 | CDD:275368 | |||
C2H2 Zn finger | 704..722 | CDD:275368 | |||
Prdm5 | XP_006506667.1 | PR-SET_PRDM5 | 2..128 | CDD:380967 | |
C2H2 Zn finger | 169..190 | CDD:275368 | |||
zf-C2H2_8 | <172..222 | CDD:374215 | 8/20 (40%) | ||
C2H2 Zn finger | 201..217 | CDD:275368 | 7/15 (47%) | ||
C2H2 Zn finger | 236..256 | CDD:275368 | 5/19 (26%) | ||
COG5048 | 258..621 | CDD:227381 | 122/365 (33%) | ||
C2H2 Zn finger | 264..287 | CDD:275368 | 5/22 (23%) | ||
C2H2 Zn finger | 297..317 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 322..342 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 350..370 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 378..398 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 406..426 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 434..455 | CDD:275368 | 9/20 (45%) | ||
C2H2 Zn finger | 463..483 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 491..511 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 519..539 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 547..567 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 575..595 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 604..625 | CDD:275368 | 9/20 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23226 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |