DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp788

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001347603.1 Gene:Zfp788 / 67607 MGIID:1914857 Length:884 Species:Mus musculus


Alignment Length:502 Identity:180/502 - (35%)
Similarity:254/502 - (50%) Gaps:5/502 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            |..|||.|:....|..|:..|:|.||:.|..|.:.|.....|..|.::|.|...:.|..|...|.
Mouse   268 CLQCGKAFRNFSSLQKHKIAHTEEKPYKCHYCNKVFICQGSLQSHIRVHTGEKPYECKQCGKAFR 332

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            .|:|..||.|.|:.:||:.|..|.|:|.....|..|.|:|:.|.|:.|:.|.|.|.....:..|.
Mouse   333 VNSSFWRHKKVHTGEKPYECKQCGKSFIYPSLLQTHERTHSAEKPYSCKQCGKAFKSHSSLRVHE 397

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            |.|||:.|:.|..|.:||........|...|:|..|:.|..|||.:.|...|..|.|:||.|.|:
Mouse   398 RNHTGKKPYECKQCGRSFIYPCLLQIHERTHSGVKPYGCKQCGKAFRRLSDLRVHERTHTGEKPY 462

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            .|:.|.|||..:.....|...||||.|::|..|||.|.....|..|.|.||||.|:.|..|.|.|
Mouse   463 ECKQCAKSFINRYLLKMHQKSHTGEKPYKCKICSKAFVYPSLLKLHERSHTGEKPYPCKQCDKAF 527

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            .....|..|.|.||||.|:.|..|.:||...:.:..|.|.||....:.|.:|:|.|..:..|..|
Mouse   528 IFPSLLKLHERTHTGEKPYACKQCGEAFKSYNSLQRHKRIHTDVKAYVCKHCSKAFICQRSLQLH 592

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|.|||:.|::|..|..:|.....|..|..:|||.:.::|:.|.::|.....|..|.|.||...|
Mouse   593 NRTHTGEKPYKCEQCGNSFRYHNSLQRHKIIHTGKNLYECKQCDRSFIYPYLLQIHDRTHSGGKP 657

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.|..|.|.:.....|..| .|.|:.::|::|:.|||:|....:|..|:|:||.    |:|:.|:
Mouse   658 YECTQCGKSYIYPSLLRIH-ERTHSAEKPYSCKQCGKAFKSHSSLRVHERNHTG----EKPYECK 717

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            :|.::||....|.:|.|.|||.||:.|..|.|||....:.:.|.|::
Mouse   718 QCGRSFIYPCLLQTHERIHSGVKPYECKQCGKAFRGHSSFRVHKKLH 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 8/19 (42%)
COG5048 300..723 CDD:227381 152/422 (36%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 5/19 (26%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 6/17 (35%)
Zfp788NP_001347603.1 KRAB 23..64 CDD:307490
C2H2 Zn finger 240..260 CDD:275368
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
zf-H2C2_2 308..332 CDD:316026 6/23 (26%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
zf-H2C2_2 336..361 CDD:316026 11/24 (46%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 380..400 CDD:275368 6/19 (32%)
C2H2 Zn finger 408..428 CDD:275368 5/19 (26%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
C2H2 Zn finger 464..484 CDD:275368 6/19 (32%)
COG5048 488..883 CDD:227381 101/282 (36%)
C2H2 Zn finger 492..512 CDD:275368 8/19 (42%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 548..568 CDD:275368 6/19 (32%)
C2H2 Zn finger 576..596 CDD:275368 7/19 (37%)
C2H2 Zn finger 604..624 CDD:275368 5/19 (26%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 6/20 (30%)
C2H2 Zn finger 688..708 CDD:275368 8/19 (42%)
C2H2 Zn finger 716..736 CDD:275368 7/19 (37%)
C2H2 Zn finger 744..764 CDD:275368 7/19 (37%)
C2H2 Zn finger 772..792 CDD:275368
C2H2 Zn finger 800..820 CDD:275368
C2H2 Zn finger 828..848 CDD:275368
C2H2 Zn finger 856..876 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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