DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Gm14326

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001177231.1 Gene:Gm14326 / 665211 MGIID:3709298 Length:554 Species:Mus musculus


Alignment Length:487 Identity:188/487 - (38%)
Similarity:251/487 - (51%) Gaps:6/487 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 HRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDK 303
            |.|..|..:|.....||:.|.......||...|.|.....|..|...|.....|:.|.:.|:.:|
Mouse    65 HERSCSAEQPSEFIQCGKAFAYESGRQRHQIKHNGEKHHDCNQCGKDFRTWNVLQIHKRTHTGEK 129

  Fly   304 PFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKK 368
            |:.|..|.|.|||..||..|.|:|.||..:.|..|.|.|.|:..:..|.|.||||.|:.|:.|.|
Mouse   130 PYDCKQCGKAFARSCHLRIHNRTHAGEKQYECNQCGKAFKRRSDLQIHKRTHTGEKPYECNQCGK 194

  Fly   369 SFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFT 433
            :|........|...|||:.|::|..|||.:::..||..|.|:||.|.|:....|||:|:|.....
Mouse   195 AFVSSGDLQKHKRTHTGEKPYECKQCGKAFSQSSHLRIHKRTHTGEKPYEWNQCGKAFARSGDLQ 259

  Fly   434 NHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGE 498
            .|...||||.|:.|..|.|.|....||..|.|:|||:.|:.|..|.|.|.....|..|.|.|||:
Mouse   260 KHKRTHTGEKPYECKQCGKAFAHSSHLHIHERRHTGDKPYECKQCGKAFAVFYTLQMHKRTHTGD 324

  Fly   499 TPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCK 563
            .|::|..|.||||....:..|.:.||||.|::|..|.|.|::..||..|.|.|||:.|:.|:.|.
Mouse   325 KPYECKQCGKAFTVIYTLQMHKQTHTGEKPYECKQCGKAFSQSRHLRIHKRTHTGEKPYECNQCG 389

  Fly   564 KTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHL 628
            |.|.|......|.|.|||:.|::|..|.|.|.|:..|..|.|.|:.:..:.|..|.|.|....||
Mouse   390 KAFARSGDQQEHKRTHTGEKPYECNQCGKAFIRRRVLQIHKRTHTGEKSYECKQCGKAFAGSSHL 454

  Fly   629 INHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHM 693
            ..| .|.|||::|:.|..|||:|..:..|..|:|:||.    |:.:.|::|.|.|.....|..|.
Mouse   455 RIH-KRTHTGEKPYECNQCGKAFITRRVLQIHKRTHTG----EKSYECKQCGKAFASSSDLQKHK 514

  Fly   694 RSHSGEKPHACTLCSKAFVERGNLKRHMKMNH 725
            |:||||||:.|..|.|||.:..:|:.| |..|
Mouse   515 RTHSGEKPYECKQCGKAFAQSSHLRIH-KQTH 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 2/3 (67%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 169/422 (40%)
C2H2 Zn finger 307..327 CDD:275368 10/19 (53%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Gm14326NP_001177231.1 KRAB 3..44 CDD:366587
C2H2 Zn finger 79..97 CDD:275368 5/17 (29%)
C2H2 Zn finger 105..125 CDD:275368 5/19 (26%)
COG5048 129..543 CDD:227381 169/419 (40%)
C2H2 Zn finger 133..153 CDD:275368 10/19 (53%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
C2H2 Zn finger 189..209 CDD:275368 5/19 (26%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
C2H2 Zn finger 413..433 CDD:275368 8/19 (42%)
C2H2 Zn finger 441..461 CDD:275368 8/20 (40%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..517 CDD:275368 7/19 (37%)
C2H2 Zn finger 525..545 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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