DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp997

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001171303.1 Gene:Zfp997 / 628709 MGIID:3642406 Length:604 Species:Mus musculus


Alignment Length:512 Identity:204/512 - (39%)
Similarity:275/512 - (53%) Gaps:12/512 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 THV------CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFT 278
            ||.      |:.|||.|.....|..|:|.|:..:|:.|..||:.|::..:|..|.:.|.|...:.
Mouse    96 THTGEKPYKCNQCGKAFSSHSCLRYHKRNHTGERPYECNQCGKAFSSHSNLRYHKRTHTGEKPYE 160

  Fly   279 CIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFT 343
            |..|...||....|:.|.:.|:.:||:.|..|.|.|:....|..|.|:||||.|:.|..|.|.|.
Mouse   161 CNQCGKAFARPADLQYHKRTHTGEKPYECNQCGKAFSCHSGLRYHKRTHTGEKPYECNQCGKAFA 225

  Fly   344 RKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHM 408
            |...:..|.|.||||.|:.|:.|.|:|:.......|...|||:.|::|:.|||.::....|..|.
Mouse   226 RPADLQYHKRTHTGEKPYECNQCGKAFSCHSGLRYHKRTHTGEKPYECNQCGKAFSCHSGLRYHK 290

  Fly   409 RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473
            |:||.|.||.|..|||:||.......|...||||.|:.|:.|.|:|....||..|.|.||||.|:
Mouse   291 RTHTGEKPFECNQCGKAFSSHSGLRYHKRTHTGEKPYECNQCGKSFATSRHLQCHKRTHTGEKPY 355

  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTF 538
            .|:.|.|.|....||..|.|.||||.|::|..|.|||:....:.:|.|.||||.|::|..|.|.|
Mouse   356 ECNQCGKAFATSSHLQCHKRTHTGEKPYECNQCGKAFSCHSGLRHHKRTHTGEKPYECNQCGKAF 420

  Fly   539 TRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNH 603
            :|..:|.:|.|.|||:.|:.|:.|.|.|.:..||..|.|.|||:.|.:|..|.|.|:....|..|
Mouse   421 SRPAYLQHHKRTHTGEKPYECNQCGKAFAKPSHLQCHKRTHTGEKPFECNQCGKAFSCYNSLRYH 485

  Fly   604 MRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQ 668
            .|.|:.:..:.||.|.|.|....||..| .|.|||::|:.|..|||:|....:|..|:|:||.  
Mouse   486 KRTHTGEKLYECNQCGKAFATSSHLQCH-KRTHTGEKPYECNQCGKAFATSSHLHCHKRTHTG-- 547

  Fly   669 EMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNH 725
              |:||.|.:|.|.|....||..|.|:|:||||:.|..|.|||....:|:.| |..|
Mouse   548 --EKPFECNQCGKAFARPSHLQIHKRTHTGEKPYECNQCGKAFATSSHLQCH-KRTH 601

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 175/422 (41%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp997NP_001171303.1 KRAB 4..>46 CDD:214630
KRAB 4..43 CDD:279668