DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and Zfp970

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001171039.1 Gene:Zfp970 / 628308 MGIID:3652255 Length:522 Species:Mus musculus


Alignment Length:468 Identity:181/468 - (38%)
Similarity:250/468 - (53%) Gaps:6/468 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 FTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDN 322
            |.||:...|:.:..........|.|...||..:..:||::.|:.:|.:.|..|.|.|..:..|..
Mouse    56 FQTSRSHGRYERRSSAEQHSEFIQCGKAFACQSHSQRHVRIHNGEKHYECNQCGKDFGTRSVLQR 120

  Fly   323 HFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQT 387
            ..|:||||.|:.|.:|.|.|.....:..|.|||||:.|:.|:.|.|:|.::.....|...|||:.
Mouse   121 LKRTHTGEKPYECNHCGKAFAESSTLQIHKRKHTGDEPYECNHCVKAFAKRSDLQIHKRIHTGEK 185

  Fly   388 PHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSK 452
            |::|:.|||.:||..||..|.|:||.|.|:.|:.|||:|:|......|...||||.|:.|..|.|
Mouse   186 PYECNQCGKAFTRSSHLGIHKRTHTGEKPYECKQCGKAFARSSTLQTHKHTHTGEKPYECKQCGK 250

  Fly   453 TFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMV 517
            .|.:...|..|.|.||.|.|:.|..|.|.|.....|..|.|.||||.|::|..|.|||.::..:.
Mouse   251 AFAQSGPLQIHKRTHTAEKPYECKQCGKAFAHSSTLQIHKRTHTGEKPYECKQCDKAFVKRGELQ 315

  Fly   518 NHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGD 582
            .|.|.||||.|::|..|.|.|.:...|..|.|.|||:.|..|:.|.|.|.|...|..|.|.|||:
Mouse   316 IHKRTHTGEKPYECKQCGKAFAQSGTLQEHERTHTGEKPFECNQCGKAFVRCIALRIHERTHTGE 380

  Fly   583 SPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETC 647
            .|::|:.|.|.|.:...|..|.|.|:.:.|..||.|.|.|.:...|..| .|.|||::|:.|:.|
Mouse   381 KPYECKQCGKAFAQSGTLQGHERTHTGEKPFECNQCGKAFVQCIALRIH-ERTHTGEKPYECKQC 444

  Fly   648 GKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFV 712
            ||:|..:..|..|:|:||.    |:|:.|::|.|.|..:..|..|.|:|:||||:.|..|.|||.
Mouse   445 GKAFAHRSTLQIHERTHTG----EKPYECKQCGKAFAHRSTLQIHKRTHTGEKPYECKQCGKAFA 505

  Fly   713 ERGNLKRHMKMNH 725
            ....|:.| |..|
Mouse   506 HSSTLQIH-KRTH 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 4/12 (33%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 168/422 (40%)
C2H2 Zn finger 307..327 CDD:275368 6/19 (32%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 10/19 (53%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp970NP_001171039.1 KRAB 4..>45 CDD:214630
KRAB 4..43 CDD:279668
COG5048 75..477 CDD:227381 159/406 (39%)
C2H2 Zn finger 79..97 CDD:275368 5/17 (29%)
C2H2 Zn finger 105..125 CDD:275368 6/19 (32%)
C2H2 Zn finger 133..153 CDD:275368 6/19 (32%)
C2H2 Zn finger 161..181 CDD:275368 5/19 (26%)
zf-H2C2_2 173..198 CDD:290200 9/24 (38%)
C2H2 Zn finger 189..209 CDD:275368 10/19 (53%)
zf-H2C2_2 201..226 CDD:290200 13/24 (54%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
zf-H2C2_2 230..254 CDD:290200 10/23 (43%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 258..282 CDD:290200 11/23 (48%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..309 CDD:290200 12/22 (55%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 313..338 CDD:290200 11/24 (46%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 11/23 (48%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 369..394 CDD:290200 11/24 (46%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 398..422 CDD:290200 10/23 (43%)
C2H2 Zn finger 413..433 CDD:275368 8/20 (40%)
zf-H2C2_2 425..450 CDD:290200 12/25 (48%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-H2C2_2 454..478 CDD:290200 11/27 (41%)
COG5048 465..>522 CDD:227381 22/54 (41%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
zf-H2C2_2 482..506 CDD:290200 13/23 (57%)
C2H2 Zn finger 497..517 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4265
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.