Sequence 1: | NP_001245993.1 | Gene: | crol / 34592 | FlyBaseID: | FBgn0020309 | Length: | 962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001191385.1 | Gene: | RBAK / 57786 | HGNCID: | 17680 | Length: | 714 | Species: | Homo sapiens |
Alignment Length: | 589 | Identity: | 193/589 - (32%) |
---|---|---|---|
Similarity: | 280/589 - (47%) | Gaps: | 96/589 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 204 GQNV-----ALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSER----------------- 246
Fly 247 ---------KPFMCQVCGQGFTTSQDLTRHGKIHIG---------GPMFTCIVCFNVFANNTSLE 293
Fly 294 RHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGE 358
Fly 359 TPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICG 423
Fly 424 KSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHL 488
Fly 489 VNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTG 553
Fly 554 DSPHRCSYCKKT----------------------------FTRKEHLTNHVRLHTGDSPHKCEYC 590
Fly 591 QKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKG 655
Fly 656 NLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRH 720
Fly 721 MKMN 724 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crol | NP_001245993.1 | C2H2 Zn finger | 223..243 | CDD:275368 | 4/19 (21%) |
C2H2 Zn finger | 251..271 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 279..299 | CDD:275368 | 3/19 (16%) | ||
COG5048 | 300..723 | CDD:227381 | 168/450 (37%) | ||
C2H2 Zn finger | 307..327 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 335..355 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 363..383 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 391..411 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 419..439 | CDD:275368 | 10/19 (53%) | ||
C2H2 Zn finger | 447..467 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 475..495 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 503..523 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 531..551 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 559..579 | CDD:275368 | 8/47 (17%) | ||
C2H2 Zn finger | 587..607 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 615..636 | CDD:275368 | 8/20 (40%) | ||
C2H2 Zn finger | 644..664 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 676..696 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 704..722 | CDD:275368 | 6/17 (35%) | ||
RBAK | NP_001191385.1 | KRAB | 8..68 | CDD:214630 | |
C2H2 Zn finger | 165..199 | CDD:275368 | 7/45 (16%) | ||
Required for interaction with RB1. /evidence=ECO:0000269|PubMed:10702291 | 171..260 | 16/97 (16%) | |||
C2H2 Zn finger | 207..227 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 263..283 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 291..311 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 319..339 | CDD:275368 | 7/19 (37%) | ||
COG5048 | 343..701 | CDD:227381 | 134/364 (37%) | ||
C2H2 Zn finger | 347..367 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 375..395 | CDD:275368 | 10/19 (53%) | ||
C2H2 Zn finger | 403..423 | CDD:275368 | 8/19 (42%) | ||
Interaction with AR. /evidence=ECO:0000269|PubMed:14664718 | 417..714 | 101/292 (35%) | |||
C2H2 Zn finger | 431..451 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 459..479 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 513..533 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 541..561 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 569..589 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 597..617 | CDD:275368 | 8/20 (40%) | ||
C2H2 Zn finger | 625..645 | CDD:275368 | 9/19 (47%) | ||
C2H2 Zn finger | 653..673 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 681..701 | CDD:275368 | 6/19 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 499 | 1.000 | Inparanoid score | I1378 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100020 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.860 |