DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and ZNF529

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001139121.1 Gene:ZNF529 / 57711 HGNCID:29328 Length:563 Species:Homo sapiens


Alignment Length:470 Identity:156/470 - (33%)
Similarity:217/470 - (46%) Gaps:40/470 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 QVCG-QGFTTSQDLTRHGKIHIGGP---MFT--CIVCFNV--FANNTSLERHMKRHSTDKPFACT 308
            ::|| :|.....|.....||.:.||   .|:  .|:..||  :..:.||....:.|.::||:...
Human   110 KLCGLEGSIFRNDWQSKSKIDLQGPEVGYFSQMKIISENVPSYKTHESLTLPRRTHDSEKPYEYK 174

  Fly   309 ICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICK------ 367
            ..:|.|:.....|.:.:.|||...:.|..|.|||......:..:..|||..|     ||      
Human   175 EYEKVFSCDLEFDEYQKIHTGGKNYECNQCWKTFGIDNSSMLQLNIHTGVKP-----CKYMEYGN 234

  Fly   368 -----KSFT--RKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKS 425
                 |.|.  :|.|....|         :|....:.:.|...:....|.|..|..|.|..||||
Human   235 TCSFYKDFNVYQKIHNEKFY---------KCKEYRRTFERVGKVTPLQRVHDGEKHFECSFCGKS 290

  Fly   426 FSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVN 490
            |......|.|...||.|..::|..|.|.|.....|..|.|.||||.|::|.:|.|.|.....|:.
Human   291 FRVHAQLTRHQKIHTDEKTYKCMECGKDFRFHSQLTEHQRIHTGEKPYKCMHCEKVFRISSQLIE 355

  Fly   491 HIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDS 555
            |.|.||||.|:.|..|.|||.....:..|.|.|||:.|::|..|.|.|.....||.|.|.|||:.
Human   356 HQRIHTGEKPYACKECGKAFGVCRELARHQRIHTGKKPYECKACGKVFRNSSSLTRHQRIHTGEK 420

  Fly   556 PHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNK 620
            |::|..|:|.|.....||.|.|:|:|..|::|:.|.|.|.....|..|.|.||.:.|:.|.||.|
Human   421 PYKCKECEKAFGVGSELTRHERIHSGQKPYECKECGKFFRLTSALIQHQRIHSGEKPYECKVCGK 485

  Fly   621 PFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFIC 685
            .|.....|..| .|.|||::|:.|:.|||:|....:...|||.||.    ::|:.|::|..:|..
Human   486 AFRHSSALTEH-QRIHTGEKPYECKACGKAFRHSSSFTKHQRIHTD----DKPYECKECGNSFSV 545

  Fly   686 KGHLVSHMRSHSGEK 700
            .|||....:.::|||
Human   546 VGHLTCQPKIYTGEK 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 5/21 (24%)
COG5048 300..723 CDD:227381 141/414 (34%)
C2H2 Zn finger 307..327 CDD:275368 3/19 (16%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 7/32 (22%)
C2H2 Zn finger 391..411 CDD:275368 3/19 (16%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368
ZNF529NP_001139121.1 KRAB 39..>81 CDD:214630
KRAB 39..78 CDD:279668
C2H2 Zn finger 201..221 CDD:275368 5/19 (26%)
C2H2 Zn finger 256..276 CDD:275368 3/19 (16%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
COG5048 294..>361 CDD:227381 24/66 (36%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
zf-H2C2_2 325..347 CDD:290200 11/21 (52%)
COG5048 336..>408 CDD:227381 28/71 (39%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
zf-H2C2_2 353..375 CDD:290200 11/21 (52%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
zf-H2C2_2 380..405 CDD:290200 10/24 (42%)
COG5048 <392..544 CDD:227381 59/156 (38%)
C2H2 Zn finger 396..416 CDD:275368 8/19 (42%)
zf-H2C2_2 408..431 CDD:290200 11/22 (50%)
C2H2 Zn finger 424..444 CDD:275368 8/19 (42%)
zf-H2C2_2 436..459 CDD:290200 10/22 (45%)
C2H2 Zn finger 452..472 CDD:275368 7/19 (37%)
zf-H2C2_2 464..489 CDD:290200 11/24 (46%)
C2H2 Zn finger 480..500 CDD:275368 8/20 (40%)
zf-H2C2_2 492..517 CDD:290200 12/25 (48%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.