DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF490

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_065765.1 Gene:ZNF490 / 57474 HGNCID:23705 Length:529 Species:Homo sapiens


Alignment Length:415 Identity:154/415 - (37%)
Similarity:205/415 - (49%) Gaps:21/415 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 CGQGFTTSQ--DLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFAR 316
            |..|.:|||  ||..:.:...|.....|.||..||.:..||.|||:.|:..||..|         
Human   131 CPCGKSTSQIPDLNTNLETPTGLKPCDCSVCGEVFMHQVSLNRHMRSHTEQKPNEC--------- 186

  Fly   317 KEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYM 381
                     ...||.|.:|:.|.|||||...:..|.|.||||.|:.|..|.|:|.....:.||..
Human   187 ---------HEYGEKPHKCKECGKTFTRSSSIRTHERIHTGEKPYECKECGKAFAFLFSFRNHIR 242

  Fly   382 WHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHR 446
            .|||:||::|..|||.:.....|..|.::||.|.|::|:.|||:|...:.|..|...||||.|:.
Human   243 IHTGETPYECKECGKAFRYLTALRRHEKNHTGEKPYKCKQCGKAFIYYQPFLTHERTHTGEKPYE 307

  Fly   447 CDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFT 511
            |..|.|.|:...:|.:|.:.||||.|..|..|.:.|.....|..|::.|||..|:.|..|.:||.
Human   308 CKQCGKAFSCPTYLRSHEKTHTGEKPFVCRECGRAFFSHSSLRKHVKTHTGVQPYTCKKCGEAFK 372

  Fly   512 RKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHV 576
            .......|.|.|.||.|::|..|.|.|....:|..|.|.|||:..:.|..|.|.|....|...|.
Human   373 SSSSCEVHERTHFGEKPYECKQCGKAFNSSSYLQLHERVHTGEKTYECKECGKAFLYSTHFRIHE 437

  Fly   577 RLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRP 641
            |.||.:.|::|:.|.:.|....||..|.|.|:...|..|..|.|.||....|..| .|.|||:||
Human   438 RTHTREKPYECKQCGRVFIYFSHLRRHERSHTGVKPCECKQCGKAFTCLNSLKVH-KRIHTGERP 501

  Fly   642 FTCETCGKSFPLKGNLLFHQRSHTK 666
            |.|..|||:|....:|..|:|:|::
Human   502 FQCRQCGKAFSYSKSLHVHERTHSR 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 7/18 (39%)
C2H2 Zn finger 279..299 CDD:275368 10/19 (53%)
COG5048 300..723 CDD:227381 135/367 (37%)
C2H2 Zn finger 307..327 CDD:275368 1/19 (5%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 5/19 (26%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF490NP_065765.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53
KRAB 56..97 CDD:307490
C2H2 Zn finger 133..150 CDD:275368 6/16 (38%)
C2H2 Zn finger 158..178 CDD:275368 10/19 (53%)
COG5048 192..>505 CDD:227381 121/313 (39%)
C2H2 Zn finger 196..216 CDD:275368 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 280..300 CDD:275368 7/19 (37%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
C2H2 Zn finger 336..356 CDD:275368 5/19 (26%)
C2H2 Zn finger 364..384 CDD:275368 6/19 (32%)
C2H2 Zn finger 392..412 CDD:275368 7/19 (37%)
C2H2 Zn finger 420..440 CDD:275368 7/19 (37%)
C2H2 Zn finger 448..468 CDD:275368 7/19 (37%)
C2H2 Zn finger 476..496 CDD:275368 8/20 (40%)
C2H2 Zn finger 504..524 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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