DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and ZNF304

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001277247.1 Gene:ZNF304 / 57343 HGNCID:13505 Length:706 Species:Homo sapiens


Alignment Length:646 Identity:202/646 - (31%)
Similarity:289/646 - (44%) Gaps:95/646 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LPPATSGNGGQQVTVTTTSSSTSSGGSTTSGGTTTTAGELLMPKMEGGI-----HGVDGSGNGGN 201
            :|.:.:..||::..|...:..|::....|..|......||     |.|.     |......:...
Human    59 VPCSCAVGGGRKPWVPDRADITAATVKETYRGHGPAEWEL-----EEGFWCEAEHEAPSEQSVSV 118

  Fly   202 GGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTR 266
            .|...|..|..|  :....|.|::|..:.:....|..|:..|..:|.....:|.:.|:.|.:..:
Human   119 EGVSQVRTAESG--LFQKAHPCEMCDPLLKDILHLAEHQGSHLTQKLCTRGLCRRRFSFSANFYQ 181

  Fly   267 HGK----------------------IHIGGPMFTC----------------------------IV 281
            |.|                      :|:.|..|||                            ..
Human   182 HQKQHNGENCFRGDDGGASFVKSCTVHMLGRSFTCREEGMDLPDSSGLFQHQTTYNRVSPCRRTE 246

  Fly   282 CFNVFANNTSLERH----------------------------MKRHSTDKPFACTICQKTFARKE 318
            |...|.:::||.:|                            ...|:..:||.|..|...|..|.
Human   247 CMESFPHSSSLRQHQGDYDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCLPCGNVFKEKS 311

  Fly   319 HLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWH 383
            .|.||.:.|:||....|:.|.|.|....|:..|.:.|||:..:.|..|.|:|:||:..|.|...|
Human   312 ALINHRKIHSGEISHVCKECGKAFIHLHHLKMHQKFHTGKRHYTCSECGKAFSRKDTLVQHQRVH 376

  Fly   384 TGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCD 448
            ||:..:.|..|||.|:|..||..|.|.||.|.|::|..|||:||||:....|..:||||.|:.|.
Human   377 TGERSYDCSECGKAYSRSSHLVQHQRIHTGERPYKCNKCGKAFSRKDTLVQHQRFHTGERPYECS 441

  Fly   449 FCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRK 513
            .|.|.|::..||:.|.|.|||..|:.|..|.|.|:....|:.|.|.|||...:.|:.|.|||..|
Human   442 ECGKFFSQSSHLIEHWRIHTGARPYECIECGKFFSHNSSLIKHRRVHTGARSYVCSKCGKAFGCK 506

  Fly   514 DHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRL 578
            |.:|.|...|||..|::|:.|.|.|:||:.|..|.:.|||:.|:.|..|.|.|:...:|..|.|:
Human   507 DTLVQHQIIHTGARPYECSECGKAFSRKDTLVQHQKIHTGERPYECGECGKFFSHSSNLIVHQRI 571

  Fly   579 HTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFT 643
            |||..|::|..|.|.|:....|..|.|.|:...|:.|:.|.|.:....||:.| .:.|||.||:.
Human   572 HTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYVCSECGKAYISSSHLVQH-KKVHTGARPYE 635

  Fly   644 CETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHAC 704
            |..|||.|.....|:.|||.||.    |:|:.|.:|.|.:....|||.|.::|:||:.|.|
Human   636 CSECGKFFSRNSGLILHQRVHTG----EKPYVCSECGKAYSRSSHLVRHQKAHTGERAHEC 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 251..271 CDD:275368 5/41 (12%)
C2H2 Zn finger 279..299 CDD:275368 6/75 (8%)
COG5048 300..723 CDD:227381 163/405 (40%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
C2H2 Zn finger 391..411 CDD:275368 10/19 (53%)
C2H2 Zn finger 419..439 CDD:275368 9/19 (47%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 9/19 (47%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 1/1 (100%)
ZNF304NP_001277247.1 KRAB 14..73 CDD:214630 3/13 (23%)
KRAB 14..53 CDD:279668
C2H2 Zn finger 169..186 CDD:275368 5/16 (31%)
C2H2 Zn finger 216..236 CDD:275368 1/19 (5%)
C2H2 Zn finger 245..264 CDD:275368 5/18 (28%)
C2H2 Zn finger 272..292 CDD:275368 0/19 (0%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
COG5048 325..680 CDD:227381 145/359 (40%)
C2H2 Zn finger 328..348 CDD:275368 6/19 (32%)
zf-H2C2_2 340..365 CDD:290200 9/24 (38%)
C2H2 Zn finger 356..376 CDD:275368 8/19 (42%)
C2H2 Zn finger 384..404 CDD:275368 10/19 (53%)
zf-H2C2_2 396..421 CDD:290200 13/24 (54%)
C2H2 Zn finger 412..432 CDD:275368 9/19 (47%)
zf-H2C2_2 425..449 CDD:290200 10/23 (43%)
C2H2 Zn finger 440..460 CDD:275368 8/19 (42%)
C2H2 Zn finger 468..488 CDD:275368 7/19 (37%)
C2H2 Zn finger 496..516 CDD:275368 9/19 (47%)
C2H2 Zn finger 524..544 CDD:275368 8/19 (42%)
zf-H2C2_2 537..561 CDD:290200 10/23 (43%)
C2H2 Zn finger 552..572 CDD:275368 7/19 (37%)
zf-H2C2_2 564..589 CDD:290200 11/24 (46%)
C2H2 Zn finger 580..600 CDD:275368 7/19 (37%)
C2H2 Zn finger 608..628 CDD:275368 6/20 (30%)
C2H2 Zn finger 636..656 CDD:275368 9/19 (47%)
C2H2 Zn finger 664..684 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.860

Return to query results.
Submit another query.