DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZSCAN32

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001271456.1 Gene:ZSCAN32 / 54925 HGNCID:20812 Length:697 Species:Homo sapiens


Alignment Length:281 Identity:87/281 - (30%)
Similarity:133/281 - (47%) Gaps:46/281 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 KTFTRKEHMV---NHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRK 401
            |...||...|   :.::|.....|.....|:.|....|.          :||.|..:..:.:..:
Human   436 KALQRKSRGVYWHSELQKGLESEPTSRRQCRNSPGESEE----------KTPSQEKMSHQSFCAR 490

  Fly   402 EHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHR----------CDFCSKTFTR 456
            :....|:            :|||:.|:..|           :||:          |..|.|||:|
Human   491 DKACTHI------------LCGKNCSQSVH-----------SPHKPALKLEKVSQCPECGKTFSR 532

  Fly   457 KEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVR 521
            ..:|:.|.|.||||.||:||.|.|.|:.:.:|..|:|.||||.|::|..|.|:|.:...::.|.|
Human   533 SSYLVRHQRIHTGEKPHKCSECGKGFSERSNLTAHLRTHTGERPYQCGQCGKSFNQSSSLIVHQR 597

  Fly   522 QHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHK 586
            .||||.|::|..|.|.|......:.|.|.|||:||::|:.|.|.|....|.:.|.:.|||:.|::
Human   598 THTGEKPYQCIVCGKRFNNSSQFSAHRRIHTGESPYKCAVCGKIFNNSSHFSAHRKTHTGEKPYR 662

  Fly   587 CEYCQKTFTRKEHLNNHMRQH 607
            |.:|::.||:...|..|...|
Human   663 CSHCERGFTKNSALTRHQTVH 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 87/281 (31%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 4/17 (24%)
C2H2 Zn finger 363..383 CDD:275368 3/19 (16%)
C2H2 Zn finger 391..411 CDD:275368 1/19 (5%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZSCAN32NP_001271456.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
SCAN 33..142 CDD:128708
SCAN 33..121 CDD:280241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..177
KRAB_A-box 218..250 CDD:295379
Myb_DNA-bind_4 253..334 CDD:290549
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..395
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..482 8/40 (20%)
COG5048 <455..668 CDD:227381 77/245 (31%)
zf-C2H2 522..543 CDD:278523 9/20 (45%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
zf-H2C2_2 535..559 CDD:290200 13/23 (57%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
zf-H2C2_2 563..588 CDD:290200 12/24 (50%)
C2H2 Zn finger 579..599 CDD:275368 6/19 (32%)
zf-H2C2_2 591..616 CDD:290200 11/24 (46%)
C2H2 Zn finger 607..627 CDD:275368 6/19 (32%)
zf-H2C2_2 623..644 CDD:290200 11/20 (55%)
C2H2 Zn finger 635..655 CDD:275368 6/19 (32%)
zf-H2C2_2 647..671 CDD:290200 8/23 (35%)
zf-C2H2 661..683 CDD:278523 6/21 (29%)
C2H2 Zn finger 663..683 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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