DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF44

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001157748.1 Gene:ZNF44 / 51710 HGNCID:13110 Length:663 Species:Homo sapiens


Alignment Length:504 Identity:172/504 - (34%)
Similarity:248/504 - (49%) Gaps:34/504 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 CGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNT 290
            |||...:|:......|.|:.:||:.|:.||:.|::..:|.||..:. ||                
Human   194 CGKGLSYRHSFQTCERPH
TGKKPYDCKECGKTFSSPGNLRRHMVVK-GG---------------- 241

  Fly   291 SLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKH 355
                       |.|:.|.:|.|.|.....|..|.|:||||.|:.|:.|:|.|......:.|.:.|
Human   242 -----------DGPYKCELCGKAFFWPSLLRMHERTHTGEKPYECKQCSKAFPVYSSYLRHEKIH 295

  Fly   356 TGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCE 420
            |||.|:.|..|.|:|.....|:.|...|||:.|::|..|||.::....|..|.|.||.|.|:.|:
Human   296 TGEKPYECKQCSKAFPDYSSYLRHERTHTGEKPYKCKQCGKAFSVSGSLRVHERIHTGEKPYTCK 360

  Fly   421 ICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRK 485
            .|||:|.....|..|::.|:|:.||:|..|.|.|........|...||.|.|:.|..|.|..:.:
Human   361 QCGKAFCHLGSFQRHMIMHSGDGPHKCKICGKGFDFPGSARIHEGTHTLEKPYECKQCGKLLSHR 425

  Fly   486 EHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQ 550
            .....|:..|||:.|.|||.|.|||........|.|.||||.|::|..|.|.|.....|..|...
Human   426 SSFRRHMMAHTGDGPHKCTVCGKAFDSPSVFQRHERTHTGEKPYECKQCGKAFRTSSSLRKHETT 490

  Fly   551 HTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCC 615
            |||:.|::|. |.|.|:......:|...|:.:.|::|:.|.|.|:..::...|.|.||.:..:.|
Human   491 HTGEQPYKCK-CGKAFSDLFSFQSHETTHSEEEPYECKECGKAFSSFKYFCRHERTHSEEKSYEC 554

  Fly   616 NVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCP 680
            .:|.|.|:|..:|..| .|.||.::|:.|:.|.|:|.....||.|:|:||.    |||:.|:.|.
Human   555 QICGKAFSRFSYLKTH-ERTHTAEKPYECKQCRKAFFWPSFLLRHERTHTG----ERPYECKHCG 614

  Fly   681 KNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAM 729
            |.|........|.|:|:||||:.|..|.|||....:..||.:.:..|.:
Human   615 KAFSRSSFCREHERTHTGEKPYECKECGKAFSSLSSFNRHKRTHWKDIL 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 0/19 (0%)
COG5048 300..723 CDD:227381 154/422 (36%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 4/19 (21%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 5/19 (26%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/19 (42%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF44NP_001157748.1 KRAB 52..88 CDD:279668
KRAB 52..>88 CDD:214630
C2H2 Zn finger 192..211 CDD:275368 5/16 (31%)
C2H2 Zn finger 219..239 CDD:275368 7/19 (37%)
COG5048 244..655 CDD:227381 152/416 (37%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 260..282 CDD:290200 11/21 (52%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
zf-H2C2_2 290..310 CDD:290200 9/19 (47%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
zf-H2C2_2 318..339 CDD:290200 9/20 (45%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
zf-H2C2_2 343..366 CDD:290200 11/22 (50%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 4/19 (21%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 456..480 CDD:290200 11/23 (48%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
C2H2 Zn finger 499..518 CDD:275368 5/19 (26%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
C2H2 Zn finger 554..574 CDD:275368 8/20 (40%)
zf-H2C2_2 566..589 CDD:290200 9/23 (39%)
C2H2 Zn finger 582..602 CDD:275368 8/19 (42%)
zf-H2C2_2 595..619 CDD:290200 13/27 (48%)
C2H2 Zn finger 610..630 CDD:275368 6/19 (32%)
zf-H2C2_2 624..647 CDD:290200 12/22 (55%)
C2H2 Zn finger 638..658 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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