DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and Zfp992

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001078991.1 Gene:Zfp992 / 433791 MGIID:3700963 Length:573 Species:Mus musculus


Alignment Length:521 Identity:195/521 - (37%)
Similarity:265/521 - (50%) Gaps:51/521 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 NVAL-APDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
            ||.| ||..||..| .|..|    ..||..|..:..|...|       ||....:.:.       
Mouse    91 NVILEAPQCTPYKT-NHTSD----ALQFSNQKRLKPRNTKE-------VCKYNDSVNS------- 136

  Fly   270 IHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFR 334
                      :..|:..:.|..:....|:|:.:..     .:|.|..| |.....|::||..|::
Mouse   137 ----------LTLFSTISLNQGIHMQKKKHNGNAE-----SEKAFISK-HKVMVKRNNTGVNPYK 185

  Fly   335 CQYCAKTFTRKEHM-----VNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVC 394
            |....|..|:::.:     :.|.:||     .|.....|.||.:.....|...|..:..::|..|
Mouse   186 CSKFDKYLTQRDKLQSQQRIYHEKKH-----FRSSKSDKCFTHQIDLSIHQGIHAEEKIYKCSEC 245

  Fly   395 GKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEH 459
            .|.:|.|.||..|.|.||.|.|::|..|.|.|::|.|...|...||||.|::|..|.|.||.|.:
Mouse   246 DKCFTHKFHLNIHQRIHTGEKPYKCSECDKCFTQKSHLNIHQRIHTGEKPYKCIVCEKCFTEKGN 310

  Fly   460 LLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHT 524
            |..|.|.|||:.|::||.|.|.||:|.||..|.|.||||.|:||:.|.|:||...|:..|.|.||
Mouse   311 LRIHQRIHTGDKPYKCSECDKCFTQKSHLNIHQRIHTGEKPYKCSKCDKSFTENGHLRIHQRNHT 375

  Fly   525 GESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEY 589
            ||.|:||:.|.|:||...||..|.|.|||:.|::||.|.|.||:|..|..|.|:|.|:.|:||..
Mouse   376 GEKPYKCSQCDKSFTENGHLRIHQRIHTGEKPYKCSECDKCFTKKFSLRIHQRIHRGEKPYKCSE 440

  Fly   590 CQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLK 654
            |.|.||.|..|..|.|.|:.:.|:.|:.|:|.||....|..| .|.|||::|:.|..|.|.|..|
Mouse   441 CDKCFTFKGSLRIHQRIHTGEKPYKCSECDKSFTENGCLRIH-QRIHTGEKPYKCTECDKCFTFK 504

  Fly   655 GNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKR 719
            |:|..|||.||.    |:|:.|.:|.|:|..||.|..|.|.|:||||:.|:.|.|.|.|:|:.:.
Mouse   505 GSLRIHQRIHTG----EKPYKCTECDKSFTEKGKLRIHQRIHTGEKPYKCSECDKCFTEKGHQRI 565

  Fly   720 H 720
            |
Mouse   566 H 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 251..271 CDD:275368 2/19 (11%)
C2H2 Zn finger 279..299 CDD:275368 3/19 (16%)
COG5048 300..723 CDD:227381 174/426 (41%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 4/24 (17%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 11/19 (58%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 10/19 (53%)
C2H2 Zn finger 587..607 CDD:275368 9/19 (47%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 9/19 (47%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp992NP_001078991.1 KRAB 13..>55 CDD:214630
KRAB 13..52 CDD:279668
C2H2 Zn finger 186..206 CDD:275368 3/19 (16%)
C2H2 Zn finger 218..234 CDD:275368 4/15 (27%)
C2H2 Zn finger 242..262 CDD:275368 9/19 (47%)
zf-H2C2_2 254..279 CDD:290200 12/24 (50%)
COG5048 266..>550 CDD:227381 135/288 (47%)
C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
zf-H2C2_2 282..306 CDD:290200 10/23 (43%)
C2H2 Zn finger 298..318 CDD:275368 9/19 (47%)
zf-H2C2_2 310..335 CDD:290200 12/24 (50%)
C2H2 Zn finger 326..346 CDD:275368 11/19 (58%)
zf-H2C2_2 338..362 CDD:290200 13/23 (57%)
C2H2 Zn finger 354..374 CDD:275368 8/19 (42%)
zf-H2C2_2 366..390 CDD:290200 12/23 (52%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
zf-H2C2_2 394..418 CDD:290200 12/23 (52%)
C2H2 Zn finger 410..430 CDD:275368 10/19 (53%)
zf-H2C2_2 422..446 CDD:290200 10/23 (43%)
C2H2 Zn finger 438..458 CDD:275368 9/19 (47%)
zf-H2C2_2 450..474 CDD:290200 8/23 (35%)
C2H2 Zn finger 466..486 CDD:275368 8/20 (40%)
zf-H2C2_2 479..502 CDD:290200 10/23 (43%)
C2H2 Zn finger 494..514 CDD:275368 10/19 (53%)
zf-H2C2_2 506..530 CDD:290200 11/27 (41%)
C2H2 Zn finger 522..542 CDD:275368 9/19 (47%)
zf-H2C2_2 535..558 CDD:290200 11/22 (50%)
C2H2 Zn finger 550..566 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

Return to query results.
Submit another query.