DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and Zfp873

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:XP_036011778.1 Gene:Zfp873 / 408062 MGIID:3040689 Length:673 Species:Mus musculus


Alignment Length:593 Identity:202/593 - (34%)
Similarity:286/593 - (48%) Gaps:42/593 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            |:...|.|...:.|..|.:.|...:|:.|..||:.: .|.....|.:.|:|...:.|..|...|.
Mouse   107 CNQYSKAFVNFHSLPQHAKNHPREQPYECNHCGKAY-VSPSSQIHKRSHVGEKPYECSKCGKAFE 170

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            |:..|:...|.|:.:|.|.|:.|.|.||.:.:|..|.|.||||.|:.|..|.|.||.:.::..|.
Mouse   171 NDNHLQNREKHHTLEKLFECSQCGKAFASRSYLPIHRRIHTGEKPYECTQCGKAFTSRSYLKIHK 235

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            ..||||.|:.|:.|.|:|........|..:||.:.|::|..|.|.:.....|..|.|:||.|.|:
Mouse   236 SVHTGEKPYECNQCSKAFANFYSLRQHEKYHTREKPYECSHCSKAFPSPSSLQVHERTHTGEKPY 300

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            .|..|||:|........|...||||.|:.|..|.|.|..:.:|..|.|.||||.|:.||.|.|.|
Mouse   301 DCTECGKAFISHSSLQIHKRVHTGEKPYECTLCGKAFVNRSYLEVHKRIHTGEKPYECSQCSKAF 365

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            .....|..|.:.||.|.|::|:.|:|||....|:..|.|.||||.|:.|:.|.|.|||..:|..|
Mouse   366 ANFRSLRQHEKNHTREKPYECSQCSKAFVSPCHLQIHQRTHTGEKPYDCSDCGKAFTRLSNLQVH 430

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|.|||..|:.||.|.|.|....:|..|.|.|||:.|:.|..|.|.|..:..|..|.:.|:.:.|
Mouse   431 KRTHTGQKPYCCSQCGKAFPCFSNLQIHERTHTGEKPYACNQCGKAFASRASLQYHEKHHTGEKP 495

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.||.|.|.|....||..| .|.|||::|:.|..|||:|..:.||..|:||||.    |:|:.|.
Mouse   496 YGCNQCGKAFVSPSHLQIH-QRTHTGEKPYECSQCGKAFARRSNLQIHERSHTG----EKPYDCN 555

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIP 742
            :|.|.|..:..|..|.:.|:||||:.|:.|.|.|..|..|:.|.:.:..:.              
Mouse   556 QCGKAFASRASLQYHEKHHTGEKPYGCSQCGKGFALRSLLQVHERTHTGEK-------------- 606

  Fly   743 AGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAGGAG-AVQLTPGLVPLVTS-----TLISH 801
                            ||.......|..:.:.....||:| |.:...|..|:::.     :.:|.
Mouse   607 ----------------PHQCTQCGHHPPEVVEKKGYGGSGPAKKWFFGASPVLSGNWQFISQVSI 655

  Fly   802 NAAAQQQS 809
            |::...|:
Mouse   656 NSSVYSQT 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 169/422 (40%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 9/19 (47%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 6/19 (32%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Zfp873XP_036011778.1 KRAB 4..44 CDD:396083
C2H2 Zn finger 107..127 CDD:275368 5/19 (26%)
C2H2 Zn finger 135..154 CDD:275368 5/19 (26%)
COG5048 158..573 CDD:227381 164/419 (39%)
C2H2 Zn finger 162..182 CDD:275368 6/19 (32%)
C2H2 Zn finger 190..210 CDD:275368 8/19 (42%)
C2H2 Zn finger 218..238 CDD:275368 6/19 (32%)
C2H2 Zn finger 246..266 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
C2H2 Zn finger 470..490 CDD:275368 6/19 (32%)
C2H2 Zn finger 498..518 CDD:275368 9/20 (45%)
C2H2 Zn finger 526..546 CDD:275368 9/19 (47%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1328
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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