DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF470

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001001668.3 Gene:ZNF470 / 388566 HGNCID:22220 Length:717 Species:Homo sapiens


Alignment Length:504 Identity:198/504 - (39%)
Similarity:285/504 - (56%) Gaps:6/504 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 HRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDK 303
            |::...|:|...|..|.:.|:....||.|.:||.|...:.||.|...|:.:..|.:|.:.|:.:|
Human   218 HK
QDRGEKKLLKCNDCEKIFSKISTLTLHQRIHTGEKPYECIECGKAFSQSAHLAQHQRIHTGEK 282

  Fly   304 PFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKK 368
            ||.||.|.|.|::..||..|.|.||||.|::|:.|.|.|::..|:..|.|.||||.|:.|..|.|
Human   283 PFECTECGKAFSQNAHLVQHQRVHTGEKPYQCKQCNKAFSQLAHLAQHQRVHTGEKPYECIECGK 347

  Fly   369 SFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMR-SHTNETPFRCEICGKSFSRKEHF 432
            :|:......:|...|||:.|::|..|||.:.:...|..|.| .||.|.||.|..|||:|:.....
Human   348 AFSDCSSLAHHRRIHTGKRPYECIDCGKAFRQNASLIRHRRYYHTGEKPFDCIDCGKAFTDHIGL 412

  Fly   433 TNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTG 497
            ..|...||||.|::|:.|.|.|:....|..|.|.||||.|:.|:.|.|.|:.:..|..|.|.|||
Human   413 IQHKRTHTGERPYKCNVCGKAFSHGSSLTVHQRIHTGEKPYECNICEKAFSHRGSLTLHQRVHTG 477

  Fly   498 ETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYC 562
            |.|::|..|.|||.:..|:.:|.|.||||.|::|..|:|||::..||..|.:.|||:.|:.|..|
Human   478 EKPYECKECGKAFRQSTHLAHHQRIHTGEKPYECKECSKTFSQNAHLAQHQKIHTGEKPYECKEC 542

  Fly   563 KKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEH 627
            .|.|::..||..|.|:|||:.|::|..|.|.|:...:|..|.|.||...|:.|..|.|.|.::..
Human   543 GKAFSQIAHLVQHQRVHTGEKPYECIECGKAFSDGSYLVQHQRLHSGKRPYECLECGKAFRQRAS 607

  Fly   628 LINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSH 692
            ||.| .|||||::|:.|..|||:|..:.:|..|||.||.    |:|:.|::|.|.|....||..|
Human   608 LICH-QRCHTGEKPYECNVCGKAFSHRKSLTLHQRIHTG----EKPYECKECSKAFSQVAHLTLH 667

  Fly   693 MRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQI 741
            .|.|:||:|:.|..|.|||.:..:|..|.:::..::.:......|:.|:
Human   668 KRIHTGERPYECKECGKAFRQSVHLAHHQRIHTGESSVILSSALPYHQV 716

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 1/3 (33%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 177/423 (42%)
C2H2 Zn finger 307..327 CDD:275368 9/19 (47%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
C2H2 Zn finger 391..411 CDD:275368 7/20 (35%)
C2H2 Zn finger 419..439 CDD:275368 6/19 (32%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 8/19 (42%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
ZNF470NP_001001668.3 KRAB 23..83 CDD:214630
KRAB 23..62 CDD:279668