DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and D19A

DIOPT Version :10

Sequence 1:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:687 Identity:167/687 - (24%)
Similarity:235/687 - (34%) Gaps:213/687 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 ERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTG 357
            |||:.|     ...|.||.:.|.:....:.|.:.|....||:|                      
  Fly   271 ERHLHR-----IIDCHICHQKFKKAIRYEEHMKYHNDLLPFQC---------------------- 308

  Fly   358 ETPHRCDICKKSFTRKEH---YVNHYMWHTGQTP-HQC--DVCGKKYTRKEHLANHMRSHTNET- 415
                :.:.|||.||....   :::|.  ||..:. |.|  :.|||.:.|...|..||:.....| 
  Fly   309 ----KVETCKKGFTTANGLRIHIDHA--HTELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGITK 367

  Fly   416 ------PFRCEICGKSFSRKEHFTNHILWHTG-ETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473
                  .|.|..|...|........|:..||| |.|:.|:.|.|.|.....|.:|:.:|.|...|
  Fly   368 AAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNH 432

  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVR-QHTGESPHKCTYCTKT 537
            .|.||....|.::....||..||.|..|||..|..|...|..:.|||: .|.......|.||.||
  Fly   433 VCPYCGVGKTTRQEWNAHILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKT 497

  Fly   538 FTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNN 602
            |.:......|.|.|||:....|..|.|.|..::.||.|::.|........|      ..::.||.
  Fly   498 FGKSHACKVHERSHTGEKCCECKICGKIFLCEKSLTKHLKTHEKRDLPPAE------PLRQQLNI 556

  Fly   603 HM---------------------------RQHSSDNPHCCN-----VCNKP-------------- 621
            .|                           :..|.|....|.     |..||              
  Fly   557 PMPGQMSVPMPGQMPMQMQTDGLVPMDPNQMPSEDMLKACGGGTAAVPPKPKNSRRVQRVDISQL 621

  Fly   622 ---------------------FTRKE--HLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQR- 662
                                 ||:||  |:               |..||:.|...||:..|.: 
  Fly   622 AGTAVNPIPSVSVPSWSPQVNFTKKEGQHI---------------CPGCGRGFNNIGNMKLHYKI 671

  Fly   663 SHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPD 727
            .|.|.::    |||..|||.|.....|..|...|:||||..|.:|.|.|.:...||:|:|.:.  
  Fly   672 IHEKVKD----FACRFCPKRFSKAQILRHHEWIHTGEKPFECKICGKHFRQETALKKHIKTHE-- 730

  Fly   728 AMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAGGAGAVQLTPGLVP 792
                 .|...|                   :|..||.|      |||..        :|.|...|
  Fly   731 -----KPNRRH-------------------VPERSAPT------QITFR--------KLEPDAEP 757

  Fly   793 LVTSTLISHNAAAQQQSQKQQAAAAAAAQQQAAAAAAAQQQAAQQQAAAAHQ--QHQQQVAAQHQ 855
                    .|....|....::|||.|                    ...|||  :::.:..|:.:
  Fly   758 --------RNFDQYQDPAVERAAATA--------------------ELLAHQLEENEAKRKAEIE 794

  Fly   856 QQAAVAAHQQQQQQLQQQQQLLQLSIQQAAHHHQQEQ 892
            :|...||..:|..:|||||::::.:.....::.|:.|
  Fly   795 RQKIAAAACEQLTKLQQQQEIIKATTSYDGYYAQKAQ 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 3/5 (60%)
COG5048 300..723 CDD:227381 129/507 (25%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 1/19 (5%)
C2H2 Zn finger 363..383 CDD:275368 6/22 (27%)
C2H2 Zn finger 391..411 CDD:275368 8/21 (38%)
C2H2 Zn finger 419..439 CDD:275368 4/19 (21%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 7/20 (35%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 4/46 (9%)
C2H2 Zn finger 615..636 CDD:275368 9/62 (15%)
C2H2 Zn finger 644..664 CDD:275368 7/20 (35%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871
SFP1 <291..363 CDD:227516 22/99 (22%)
C2H2 Zn finger 343..362 CDD:275368 7/18 (39%)
C2H2 Zn finger 377..397 CDD:275368 4/19 (21%)
zf-H2C2_2 389..414 CDD:463886 9/24 (38%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 462..483 CDD:275368 7/20 (35%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 519..539 CDD:275368 7/19 (37%)
C2H2 Zn finger 652..673 CDD:275368 7/20 (35%)
C2H2 Zn finger 681..701 CDD:275368 7/19 (37%)
zf-C2H2 707..729 CDD:395048 8/21 (38%)
C2H2 Zn finger 709..729 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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