DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZKSCAN4

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_061983.2 Gene:ZKSCAN4 / 387032 HGNCID:13854 Length:545 Species:Homo sapiens


Alignment Length:279 Identity:102/279 - (36%)
Similarity:139/279 - (49%) Gaps:25/279 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 KKYTRKEH-LANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEH 459
            ||...||| ...|:|....:.|...| .|:...|.:....:.:   |...|.|..|.|:|.:...
Human   274 KKLPEKEHGKICHLREDIAQIPTHAE-AGEQEGRLQRKQKNAI---GSRRHYCHECGKSFAQSSG 334

  Fly   460 LLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHT 524
            |..|.|.||||.|:.|..|.|||.....||.|.|.||||.|::|..|.|.|:...:::.|.|.||
Human   335 LTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHT 399

  Fly   525 GESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEY 589
            ||.|::|..|.|||::...|..|.:.|||:.|::|:.|.|.|.|..||..|.|:| ||       
Human   400 GEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIH-GD------- 456

  Fly   590 CQKTFTRKEHLNNHMRQHSSDN---------PHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCE 645
              |.....||..:...|..:::         .:.||.|.:.|||...||.| .:.|||::|:.|:
Human   457 --KNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEH-QKIHTGEKPYQCD 518

  Fly   646 TCGKSFPLKGNLLFHQRSH 664
            ||||.|.....|:.|||||
Human   519 TCGKGFTRTSYLVQHQRSH 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 102/279 (37%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368 7/15 (47%)
C2H2 Zn finger 419..439 CDD:275368 3/19 (16%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 3/19 (16%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZKSCAN4NP_061983.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..55
SCAN 49..160 CDD:128708
KRAB 221..281 CDD:214630 3/6 (50%)
zf-C2H2 320..342 CDD:306579 8/21 (38%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
zf-H2C2_2 335..357 CDD:316026 11/21 (52%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
COG5048 <374..544 CDD:227381 64/175 (37%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 9/19 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..480 6/33 (18%)
C2H2 Zn finger 489..509 CDD:275368 9/20 (45%)
C2H2 Zn finger 517..537 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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