DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crol and ZNF860

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001131146.2 Gene:ZNF860 / 344787 HGNCID:34513 Length:632 Species:Homo sapiens


Alignment Length:460 Identity:166/460 - (36%)
Similarity:235/460 - (51%) Gaps:9/460 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 GNGGGQNVALAPDGTPIATG--------THVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQ 256
            |..|.|......|.:.:.|.        .|:.:.....|.....|.:.:..|...|.|.|...|:
Human   173 GKVGNQVEKSINDASSVLTSQRISSRPKIHISNNYENNFFHSSLLTLKQEVHIREKSFQCNESGK 237

  Fly   257 GFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLD 321
            .|..|..|.:|..|::||..:.|.||..||.....|..|.:.|:.:||:.|..|.|.|.::.:|.
Human   238 AFNCSSLLRKHQIIYLGGKQYKCDVCGKVFNQKRYLACHHRCHTGEKPYKCNECGKVFNQQSNLA 302

  Fly   322 NHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQ 386
            :|.|.||||.|::|:.|.|.|:||.::..|.|.||||.|::|.:|:|:|.|..|...|...|||:
Human   303 SHHRLHTGEKPYKCEECDKVFSRKSNLERHRRIHTGEKPYKCKVCEKAFRRDSHLTQHTRIHTGE 367

  Fly   387 TPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCS 451
            .|::|:.|||.::.:..|.:|...|.....::|..|.|.||......||...|..|..::|:.|.
Human   368 KPYKCNECGKAFSGQSTLIHHQAIHGIGKLYKCNDCHKVFSNATTIANHWRIHNEERSYKCNKCG 432

  Fly   452 KTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHM 516
            |.|.|:.:|:.|.|.||||.|::|:.|.|||.....||.|...||||.|:||..|.|.|.....:
Human   433 KFFRRRSYLVVHWRTHTGEKPYKCNECGKTFHHNSALVIHKAIHTGEKPYKCNECGKTFRHNSAL 497

  Fly   517 VNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTG 581
            |.|...||||.|:||..|.|.|.::..|..|.|.|||:.|::|..|...|:||.|...|.|:|||
Human   498 VIHKAIHTGEKPYKCNECGKVFNQQATLARHHRLHTGEKPYKCEECDTVFSRKSHHETHKRIHTG 562

  Fly   582 DSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCET 646
            :.|:||:...:.|::........|.|..:..|.|:.|.|.||...|.|.| .|.|||.:.:.|..
Human   563 EKPYKCDDFDEAFSQASSYAKQRRIHMGEKHHKCDDCGKAFTSHSHRIRH-QRIHTGQKSYKCHK 626

  Fly   647 CGKSF 651
            .||.|
Human   627 RGKVF 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 2/19 (11%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
COG5048 300..723 CDD:227381 138/352 (39%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 3/19 (16%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 4/8 (50%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
ZNF860NP_001131146.2 KRAB 24..>64 CDD:214630
KRAB 24..63 CDD:279668
COG5048 <179..388 CDD:227381 68/208 (33%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..280 CDD:275368 7/19 (37%)
COG5048 284..617 CDD:227381 131/333 (39%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
zf-H2C2_2 300..325 CDD:290200 12/24 (50%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
zf-H2C2_2 328..353 CDD:290200 11/24 (46%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
zf-H2C2_2 356..380 CDD:290200 10/23 (43%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
zf-H2C2_2 468..493 CDD:290200 13/24 (54%)
C2H2 Zn finger 484..504 CDD:275368 6/19 (32%)
zf-H2C2_2 496..521 CDD:290200 12/24 (50%)
C2H2 Zn finger 512..532 CDD:275368 7/19 (37%)
C2H2 Zn finger 540..560 CDD:275368 8/19 (42%)
C2H2 Zn finger 596..616 CDD:275368 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.900

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