DRSC/TRiP Functional Genomics Resources

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Protein Alignment crol and ZNF850

DIOPT Version :9

Sequence 1:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster
Sequence 2:NP_001180481.1 Gene:ZNF850 / 342892 HGNCID:27994 Length:1090 Species:Homo sapiens


Alignment Length:502 Identity:200/502 - (39%)
Similarity:267/502 - (53%) Gaps:5/502 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 CDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFA 287
            |..|||.|..|..||.|:|.|:..||:.|:.||:.||....|.:|.:||.|...:.|..|...|.
Human   563 CKECGKSFTSRSALIQHQRIHTGEKPYHCKECGKSFTVGSTLLQHQQIHTGEKPYDCKECGKAFR 627

  Fly   288 NNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHV 352
            ....|.:|.:.|:.:||:.|..|.|.|.....|..|.|.||||.|:.|..|.|.|.::.::..|.
Human   628 LRLRLTQHQQIHTGEKPYQCQECGKAFVSVSGLTQHHRIHTGEKPYECPDCGKAFRQRTYLNQHR 692

  Fly   353 RKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPF 417
            |.||||.|:.|..|.||||.....:.|...||.:.|:....|||.:|....|..|.:.||.|.|:
Human   693 RIHTGEKPYECKECGKSFTFCSGLIQHQQNHTDEKPYDGKECGKSFTSHSTLIQHQQIHTGEKPY 757

  Fly   418 RCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTF 482
            .|:.|||||:.......|...||||..:.|..|.|:||....|:.|...||||.|:.|..|.|:|
Human   758 DCKECGKSFTSHSTLIQHQQIHTGEKLYDCKECGKSFTSHSTLIQHQPLHTGEKPYHCKECGKSF 822

  Fly   483 TRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNH 547
            |.:..|:.|...||||..:.|..|.|:||.:..::.|.|.||||.|:.|..|.|:|..:..:..|
Human   823 TLRSALIQHRPVHTGEKRYSCKECGKSFTSRSTLIEHQRIHTGEKPYHCKECGKSFAFRSAIIQH 887

  Fly   548 VRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNP 612
            .|.|||:.|:.|..|.|.|.|:..||.|.|:|||:.|::|..|.|.|.|...|..|...|:.:.|
Human   888 RRIHTGEKPYDCKECGKAFRRRSKLTQHQRIHTGEKPYRCHECGKAFVRFSGLTKHHSIHTGEKP 952

  Fly   613 HCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACE 677
            :.|..|.|.|.::.||..| .|.||||||:.|:.|||||.....|:.|||:||.    |:|:.|:
Human   953 YECKTCGKSFRQRTHLTLH-QRIHTGDRPYECKECGKSFTCGSELIRHQRTHTG----EKPYDCK 1012

  Fly   678 KCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMN 724
            :|.|.|.|...|..|.|.|:|||.:.|..|.|||.....|.||..::
Human  1013 ECGKAFRCPSQLSQHKRIHTGEKTYQCPECGKAFFYASGLSRHQSVH 1059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368 10/19 (53%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
COG5048 300..723 CDD:227381 171/422 (41%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 10/19 (53%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
C2H2 Zn finger 704..722 CDD:275368 8/17 (47%)
ZNF850NP_001180481.1 KRAB 7..67 CDD:214630
KRAB 7..46 CDD:279668
C2H2 Zn finger 199..219 CDD:275368
C2H2 Zn finger 227..244 CDD:275368
COG5048 243..659 CDD:227381 35/95 (37%)
C2H2 Zn finger 255..275 CDD:275368
C2H2 Zn finger 283..303 CDD:275368
zf-H2C2_2 296..319 CDD:290200
C2H2 Zn finger 311..331 CDD:275368
zf-H2C2_2 324..348 CDD:290200
C2H2 Zn finger 339..359 CDD:275368
zf-H2C2_2 351..375 CDD:290200
C2H2 Zn finger 367..387 CDD:275368
zf-H2C2_2 379..403 CDD:290200
C2H2 Zn finger 395..415 CDD:275368
C2H2 Zn finger 423..443 CDD:275368
zf-H2C2_2 436..460 CDD:290200
C2H2 Zn finger 451..471 CDD:275368
zf-H2C2_2 463..487 CDD:290200
C2H2 Zn finger 479..499 CDD:275368
zf-H2C2_2 493..516 CDD:290200
C2H2 Zn finger 507..527 CDD:275368
zf-H2C2_2 519..543 CDD:290200
COG5048 531..947 CDD:227381 150/383 (39%)
C2H2 Zn finger 535..555 CDD:275368
C2H2 Zn finger 563..583 CDD:275368 10/19 (53%)
zf-H2C2_2 575..599 CDD:290200 10/23 (43%)
C2H2 Zn finger 591..611 CDD:275368 7/19 (37%)
C2H2 Zn finger 619..639 CDD:275368 5/19 (26%)
zf-H2C2_2 632..656 CDD:290200 9/23 (39%)
C2H2 Zn finger 647..667 CDD:275368 7/19 (37%)
zf-H2C2_2 660..684 CDD:290200 12/23 (52%)
C2H2 Zn finger 675..695 CDD:275368 6/19 (32%)
zf-H2C2_2 687..711 CDD:290200 11/23 (48%)
C2H2 Zn finger 703..723 CDD:275368 7/19 (37%)
C2H2 Zn finger 732..751 CDD:275368 6/18 (33%)
C2H2 Zn finger 759..779 CDD:275368 7/19 (37%)
C2H2 Zn finger 787..807 CDD:275368 7/19 (37%)
C2H2 Zn finger 815..835 CDD:275368 7/19 (37%)
C2H2 Zn finger 843..863 CDD:275368 7/19 (37%)
zf-H2C2_2 856..879 CDD:290200 10/22 (45%)
C2H2 Zn finger 871..891 CDD:275368 6/19 (32%)
C2H2 Zn finger 899..919 CDD:275368 9/19 (47%)
zf-H2C2_2 912..936 CDD:290200 12/23 (52%)
C2H2 Zn finger 927..947 CDD:275368 7/19 (37%)
C2H2 Zn finger 955..975 CDD:275368 8/20 (40%)
zf-H2C2_2 967..992 CDD:290200 16/25 (64%)
C2H2 Zn finger 983..1003 CDD:275368 10/19 (53%)
zf-H2C2_2 995..1020 CDD:290200 12/28 (43%)
C2H2 Zn finger 1011..1031 CDD:275368 8/19 (42%)
zf-H2C2_2 1024..1046 CDD:290200 10/21 (48%)
C2H2 Zn finger 1039..1059 CDD:275368 8/19 (42%)
zf-H2C2_2 1052..1076 CDD:290200 3/8 (38%)
C2H2 Zn finger 1067..1087 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I11996
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1498
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.890

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